30 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Saro_0914  CDS  NC_007794  967462  969150  1689  cytochrome-c oxidase  YP_496193  decreased coverage  0.00560774  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1130  CDS  NC_007794  1175335  1176399  1065  phospho-N-acetylmuramoyl-pentapeptide- transferase  YP_496409  decreased coverage  0.0067928  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1330  CDS  NC_007794  1372662  1373597  936  2OG-Fe(II) oxygenase  YP_496608  decreased coverage  0.000246979  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1553  CDS  NC_007794  1609227  1610573  1347  putative GAF sensor protein  YP_496827  decreased coverage  0.00827304  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1635  CDS  NC_007794  1710850  1712469  1620  FAD dependent oxidoreductase  YP_496909  decreased coverage  0.000302713  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1673  CDS  NC_007794  1754081  1755694  1614  FAD dependent oxidoreductase  YP_496947  decreased coverage  0.0012513  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1734  CDS  NC_007794  1827972  1829036  1065  glycosyl transferase, group 1  YP_497008  decreased coverage  0.00199355  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1735  CDS  NC_007794  1829033  1829944  912  metallophosphoesterase  YP_497009  decreased coverage  0.0014324  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1737  CDS  NC_007794  1831758  1832441  684  GCN5-related N-acetyltransferase  YP_497011  decreased coverage  0.00558644  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1837  CDS  NC_007794  1935151  1937463  2313  peptidase S8/S53 subtilisin kexin sedolisin  YP_497111  decreased coverage  0.00570496  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1883  CDS  NC_007794  1988558  1989931  1374  TPR repeat-containing protein  YP_497157  decreased coverage  0.00380027  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1970  CDS  NC_007794  2088167  2088505  339  hypothetical protein  YP_497244  decreased coverage  0.00126739  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1971  CDS  NC_007794  2088711  2089298  588  5-formyltetrahydrofolate cyclo-ligase  YP_497245  decreased coverage  0.00597418  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_1999  CDS  NC_007794  2132808  2133530  723  nucleotidyl transferase  YP_497272  decreased coverage  0.00143776  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2097  CDS  NC_007794  2233152  2234426  1275  general substrate transporter  YP_497370  decreased coverage  0.00320357  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2142  CDS  NC_007794  2280167  2282512  2346  heavy metal translocating P-type ATPase  YP_497415  decreased coverage  3.3244e-05  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2176  CDS  NC_007794  2320276  2321145  870  hypothetical protein  YP_497449  decreased coverage  0.00706566  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2201  CDS  NC_007794  2341420  2342457  1038  SMF protein  YP_497473  decreased coverage  3.01868e-09  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
 
Saro_2202  CDS  NC_007794  2342460  2343707  1248  hypothetical protein  YP_497474  decreased coverage  6.18682e-10  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
 
Saro_2314  CDS  NC_007794  2454382  2455509  1128  peptide chain release factor 2  YP_497585  decreased coverage  0.00391464  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2491  CDS  NC_007794  2692635  2693369  735  hypothetical protein  YP_497761  decreased coverage  0.00369583  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2803  CDS  NC_007794  3026531  3028921  2391  TonB-dependent receptor  YP_498073  decreased coverage  2.8196e-07  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
 
Saro_2817  CDS  NC_007794  3040856  3041596  741  hypothetical protein  YP_498087  decreased coverage  0.00663011  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2829  CDS  NC_007794  3057306  3057845  540  hypothetical protein  YP_498099  decreased coverage  0.0013102  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_2830  CDS  NC_007794  3057855  3058298  444  hypothetical protein  YP_498100  decreased coverage  0.00199084  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_3132  CDS  NC_007794  3342011  3344215  2205  hypothetical protein  YP_498401  decreased coverage  0.00254954  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_3414  CDS  NC_009427  15848  16276  429  hypothetical protein  YP_001165800  decreased coverage  0.00846619  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_3602  CDS  NC_009427  225853  227358  1506  amidase  YP_001165988  decreased coverage  0.00171301  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_3771  CDS  NC_009427  409016  411400  2385  TonB-dependent receptor  YP_001166156  decreased coverage  9.82846e-06  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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Saro_3829  CDS  NC_009427  483730  484020  291  muconolactone delta-isomerase  YP_001166214  decreased coverage  0.00966356  n/a    Novosphingobium aromaticivorans DSM 12444  Bacteria 
 
 
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