| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3829 |
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| Symbol | |
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| ID | 5077977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 483730 |
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| End bp | 484020 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640481552 |
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| Product | muconolactone delta-isomerase |
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| Protein accession | YP_001166214 |
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| Protein GI | 146276054 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4829] Muconolactone delta-isomerase |
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| TIGRFAM ID | [TIGR03221] muconolactone delta-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00966356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTTCC AGGTCGAAAT GACCGTCGAT ATCCCGCTGG ATTTCGACAA GGCAGAGGCC
GAACGGATCA AGGCCGTCGA AAAGGCCTAT TCCCACGAAC TTCAGCGCAG CGGCGAATGG
CGCCACATCT GGCGGGTCGC CGGACAATAC GCCAACCTGT CGATCTTCGA TGTGGCAAGC
AACGAGCGCC TGCACGAGAT CCTCATGGGA CTGCCGCTCT ATCCCTTCAT GACCATCAAG
GTCACGCCGC TTTGCCGGCA CCCCTCTTCC ATTCGCGACG ACGATCGCTG A
|
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| Protein sequence | MLFQVEMTVD IPLDFDKAEA ERIKAVEKAY SHELQRSGEW RHIWRVAGQY ANLSIFDVAS
NERLHEILMG LPLYPFMTIK VTPLCRHPSS IRDDDR
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