Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2176 |
Symbol | |
ID | 3918841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2320276 |
End bp | 2321145 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640444931 |
Product | hypothetical protein |
Protein accession | YP_497449 |
Protein GI | 87200192 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00706566 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGCG ATTCGGGATT GCGACGCGGG GTTGAGAGCC GCCTCGAATT CATCGAATTT AGGCTCTTCT GGGAAGGGCA TGTCAACCGG AGTGACCTGA TCGAAGTTTT CGGCGTTTCG ATCAACCAAG CTTCGACGGA TCTGAACAGA TATCTCGGCC TGGCTGAAGC CAACATGGTC TACGACAAGA GCGCCAGGAC TTATGTTCGT AGCTCGACAT TCACGCCCGT ATTTCACCAG CCCGACGCAT CCCAATATCT CTCCCAGCTC AGATCGCTCT CGGATGGGAT CATTGCCGCC GACGACAGCT GGATCGGAGG TTTGCCGAGT TTCGCCTGTG TCCCGACTCC CGCCCGCGGT GTCTCGTCCA AAATTCTGAG GGCCATCGTA ACGGCGATCA AGCGGCACGA GGCGATCGAG GTTTTCTACC AATCGATGTC ATCCCCTGAG CCCGCTTGGC GGTGGATCGA ACCTCATGCC TTGGTGTTTG ACGGCTTCAG ATGGCATGCT CGGGCGCATT GCCCACGCAG TAGCGCCTTC AAGGATTTTG TTCTCTCGCG CATCACCGAT ACGCGTTCAT CAAAGCCGGC AGAAGCTAGG CCTTCCGGCG ATCGCGAATG GGAGGAGCAT GTTGAGCTGC AGATCGCGCC TCATCCCGCG CTGAGCGCTG GTCAGCGCAA GGCGATCGAG CTCGATTACG GAATGGAAAG GGGCGTGACG ACCATCCCGG TGCGGCGGGC TCTCCTCTAC TACGCATTGA AGCGCCTTGG ATTGGATACC GATCCGGCAG CACGTAGCCC CCAGGACCAG CAGATTGTTC TATTGAACTG CCGCAACATC GACATCGGTT CGAAGGGTGT CATCGAATAG
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Protein sequence | MDSDSGLRRG VESRLEFIEF RLFWEGHVNR SDLIEVFGVS INQASTDLNR YLGLAEANMV YDKSARTYVR SSTFTPVFHQ PDASQYLSQL RSLSDGIIAA DDSWIGGLPS FACVPTPARG VSSKILRAIV TAIKRHEAIE VFYQSMSSPE PAWRWIEPHA LVFDGFRWHA RAHCPRSSAF KDFVLSRITD TRSSKPAEAR PSGDREWEEH VELQIAPHPA LSAGQRKAIE LDYGMERGVT TIPVRRALLY YALKRLGLDT DPAARSPQDQ QIVLLNCRNI DIGSKGVIE
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