Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3132 |
Symbol | |
ID | 3918174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3342011 |
End bp | 3344215 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640445916 |
Product | hypothetical protein |
Protein accession | YP_498401 |
Protein GI | 87201144 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00254954 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATCG TCATGGCAAC GCTCATTCTC ACGGCCGTCG GCACGGCCCT CGGTGGCCCG CTTGGCGGCG CGATCGGCGC CCTGCTCGGA CAGCAGGTGG ATTCCGCCAT TGTCGGCGGG CGCAAGGTCG AAGGCCCCCG GCTCAAGGAG CTTTCGGTCC AGACATCCAG CTACGGATCG TCGCTGCCAC TGCATTTCGG GCGCACACGA GCCGCAGGCA GCGTGATCTG GGCAACCGAA CTGGTCGAAC ACAAGGAAAA GTCGGGCGGC GGCAAGGGGC GACCTTCGGT CACCAGCTAC AGCTATACCG CATCGTTTGC CGTTGCCCTG GCCGGTCGCC CCATCTCCGG AATTGGCCGG GTGTGGGCGG ACGGAAACCT TCTGCGCGGG GAAAGCGGCG ACCTGAAGGT CGGCGGGACC ATGCGCATCC ACACCGGTCA CGGGGATCAG GCAGCCGACC CGCTGCTGTC CCAGGCCGAG GGAGCGGCCA TGAACCCGGC CTATCGCAAC ACCGCCTATG TGGTGTTCGA GGATCTGGAG CTTGCCGACT ACGGCAACAG GCTACCGTCG CTGACCTTCG AGATCATCGC CGACGACGCG CCGACTTCGG TCGCGAGCAT CATCGCATCG CTCCTGCCGG ACGCCGATGT GCAGGAACTT GTCGGTGAGA CCCTCCCCGG CTTCAGCATC GACCAGGGGA CGGCCTCGGA CGTGCTGGCA GTGCTTTCCG ATCTGTCACC TCTGAGCTGT GCGGTGCGCG AGGAAACGGT GACGTTTCGC AACGCGGACG AAATAGGGTC CGCGTCGCTG CCACTGCTCC CGCTGCCGAC CGCTGGCGGG GAGCGTGCCG ATGACGCGAA GATCGAGGGC TGGTCGCGCA AGCGGCAGGC GCTGCCGGCC GCCAGGCAAT GCGTCGTGCG ATACTATGAC ACCGCGCGGG ACTATCAGCC CGGCCTGCAA CGCAGCATCG GCCGCAACAG TCCCGGCGAC GTCCGTTCGA TCGAGCTTCC CGCCGCGCTC TCAGCGACGC AGGCCCGCTC CATCGCGGAG CGTTCCGCGC GCCGCCTGAC CGTGCCGGGT GACACGATGC GCTATCGCAT CACGGAGTTG GACCGCACGT TCGAGCCGGG TGCGTTCGTG AAGGCGCAGA CCGGCGATGA GGTCTGGCGG ATCGACGAAT GGGAATGGCA GGCCGATGGC CTGATGCTCG GGCTGTCGGT TGTGCCGGCC CGGTCCCAGT CGGCGAGCGC GGCGGACCCA GGAAGGTCGA ACCAGTCGGC CGATGTCCTC GCAGTCCCCA CGCGGATCAC CGCCTTCGAG ATTCCCTGGA ACGAATCCGA TTCGAGCACT GCTGCAATCG TGCGCGTTGC CGCGACTGCA GCGACATCTG CCTGGTCCGG CGCGGCGCTT TACTGCCGGC AACTCGACGA GACGCTTCAG TCGCTCGGGT CAACGGGGCG CCAGCGGGCG ATTGCGGGCG TTTCCGCAAC CACCCTCGCC GCGGCCTCGC CGCTCCTGCT CGACACGACC GGGACAGTCG ACGTGGAGCT TGCCTCGGCC GACTTCGTAC TGGGCAATGC GACCTGGGCA CAATTGATGC AGGGTGCGAA CACCGCCCTC CTGGGCGGCG AATTCGTGCA GTTCGCAAGG GCCGAACGCG TGGCGTGGGC AACGTGGCGG CTTGGCGGGC TCCTGCGGGG GCGAGGCGGC ACAGAGCACG CGGTTGCGAC CCACATCGTG GGCGAGGCCT TCGTGCTGAT CGACGAGAAC CTCGTTGCGC CCGACCTGTC TGGGATCGAC ACCGCCACGG CAGAGATAAT TGCCATAGGC CGCGGCGACA ACGAGGCGGC ATCCAGCGCC ATCCTGAACA CCGGCCTTAC GCTTCGGCCG CTGATGCCGG TGCACGGCAA GGCCACTCGG ACGTCCGACG GCGGAATCGA GCTGCAATGG GTGCGCCGTG CGCGCGGAGC CTGGACCTGG CGCGACGAAG TCGACGTTCC GCTCGATGAA GGCAGCGAGC AGTGGGAAGT CGCCTTCTCC CAGGGCACGT CGGCGCTGCG CGTCTGGCTG ACGGACGAGA GCACGCTGCT GATCGATGCG GCGATGGCGG ACGAACTGGC GCTTGCCCCG GATGGAACCT TCCTGGTGCG CCAGGTTGGT CGCGCCGCGA TGTCGCTGCG CCTTGCCATT CCCTTCCCCG CCTGA
|
Protein sequence | MLIVMATLIL TAVGTALGGP LGGAIGALLG QQVDSAIVGG RKVEGPRLKE LSVQTSSYGS SLPLHFGRTR AAGSVIWATE LVEHKEKSGG GKGRPSVTSY SYTASFAVAL AGRPISGIGR VWADGNLLRG ESGDLKVGGT MRIHTGHGDQ AADPLLSQAE GAAMNPAYRN TAYVVFEDLE LADYGNRLPS LTFEIIADDA PTSVASIIAS LLPDADVQEL VGETLPGFSI DQGTASDVLA VLSDLSPLSC AVREETVTFR NADEIGSASL PLLPLPTAGG ERADDAKIEG WSRKRQALPA ARQCVVRYYD TARDYQPGLQ RSIGRNSPGD VRSIELPAAL SATQARSIAE RSARRLTVPG DTMRYRITEL DRTFEPGAFV KAQTGDEVWR IDEWEWQADG LMLGLSVVPA RSQSASAADP GRSNQSADVL AVPTRITAFE IPWNESDSST AAIVRVAATA ATSAWSGAAL YCRQLDETLQ SLGSTGRQRA IAGVSATTLA AASPLLLDTT GTVDVELASA DFVLGNATWA QLMQGANTAL LGGEFVQFAR AERVAWATWR LGGLLRGRGG TEHAVATHIV GEAFVLIDEN LVAPDLSGID TATAEIIAIG RGDNEAASSA ILNTGLTLRP LMPVHGKATR TSDGGIELQW VRRARGAWTW RDEVDVPLDE GSEQWEVAFS QGTSALRVWL TDESTLLIDA AMADELALAP DGTFLVRQVG RAAMSLRLAI PFPA
|
| |