Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2142 |
Symbol | |
ID | 3918807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2280167 |
End bp | 2282512 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640444897 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_497415 |
Protein GI | 87200158 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG2217] Cation transport ATPase [COG3350] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000033244 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGT CGCATCACGA CCTTGCGAAA TGCACCCATT TCGGATCGAA GGCTCCAGGA ACGGTGATTG ACCCCGTCTG CGGAATGAGC GTTGACCCGG CAACCACGCC GCATGTCGCG ACCCATGACG GCGCCCATCA CTACTTCTGC AGCGCTGGCT GTCTGGCCAA GTTCAAGACC GATCCAGCGC GCTATATGAG CGATGCACCG CGGCCAACAG AATATGTGGC AGAAGGCGCG ATCTGGACCT GCCCGATGCA TCCCGAGGTT CAGCAGTCCG GGCCGGGAAG CTGCCCGATC TGCGGCATGG CCCTGGAACC GATGGCCCCG ACGCTCAGCG ATGGACCGTC ACCGGAATAT GCCGACATGA AGCGGCGCTT CGTGATCGGC CTGATCCTCG CCTTGCCGGT GGTAGCGCTC GAAATGGGCG GGCATCTGAC CGGACTGCGC CATTATTTGG ATGGAAACAT CGCCAGCCTG ATCCAGATGG TTCTGGCGAC GCCGGTGGTC CTGTGGGCAG GCTGGCCATT TTTCGAACGC GGCTGGGCCT CGGTGAAAAG CGGCCACCTC AACATGTTCA CCCTGATTGC GATGGGAACG GGCGTTGCCT GGATGTACAG CATGGCGGCG ACGCTCGCGC CCAGTATGTT CCCGCCCGCG TTTCGCGCAA TGGACGGCTC AGTCGCGGTC TATTTCGAGG CGGCGGCGGT CATTACCGTG CTGGTCTTGC TTGGCCAACT GCTTGAACTG CGTGCCCGGG AAACAACCAG CGGTGCGATC CGCGCATTGC TCGACCTTTC GCCCAAGCTC GCCCGCCGGG TTCGTCCCGA TAGTAGTGAC GAGGAGATCA CACTCGACCA GGTTCTGGTC GGCGACACGC TACGCGTTCG TCCTGGCGAG AAAGTTCCGG TTGATGGCGT GGTCCTGGAG GGCCGCGGAA CGGTCGATGA ATCGATGGTA ACCGGCGAAT CCATGCCGGT GACCAAGGAG GCATCGTCGA AGCTGATCGG TGGCACGATA AACCAGACCG GCGGCCTCGT GATGCGCGCC GAGAAGATCG GGCGCGATAC CATGCTGGCG CGCATCGTCC AGATGGTCGC AGAAGCCCAG CGCAGCCGGG CGCCGATTCA ACGGCTTGCC GACACCGTGT CGGGCTGGTT CGTGCCGGCA GTGATTGCGG TCGCAGCAGT CGCATTCGCC GCCTGGTCGC TGGTCGGTCC GTCCCCGGCG ATGGGTTACG GTCTGATTGC GGCAGTAGCT GTGCTGATCA TCGCCTGTCC CTGCGCGCTC GGCTTGGCCA CTCCGATGTC GATCATGGTG GGGGTTGGAC GCGGTGCGCA GGCCGGTATC CTCATCAAGA ATGCAGAGGC GCTCGAACGC ATGGAGAAGG TCGATACGCT TGTCGTCGAC AAGACCGGCA CGCTCACCGA GGGCAAGCCC GCGGTGGTTG CGATCGAGAC GGCTGAAGGG TTCGACAGCC AAGAAGTTCT GCGCCTTGCC GCGAGCCTTG AACGCAGCAG CGAACATCCG CTGGCCCTGG CTATTGTGAG GGATGCAGAA GCCAAGGGGC TCGCAATAAG CGAACCGGGC GACGTCGATC AGCCAGTCGG CAAGGGTATC ACCGGCATCG TCGATGGATA TCGACTTGTT GCTGGAAATG CCCGCTTTCT TGAGGAACAG GGGATCTCCA CCGCCCAACT GGCGCAACGT GCTGATGCCC TGCGTGCCGA AGGTGCGACC GCGATCTTCC TCGGCATTGA TGGCCAGGTG GCGGGTTCTA TCGGCATTGC CGATCCGGTA AAAGCGACAA CGCCTGCCGC GCTCAAGGCT CTGGCCGAGG TGGGGATCCA TGTCATCATG CTGACGGGCG ACAATCGCGT CACCGCTGAG GCCATCGCAC GACGCCTCGG TATCGCCGAC GTCGAGGCAG ATGTCCTTCC CGACCAGAAG AGCGCTATCG TCAAGCGCCT GAGAGACGAG GGACGGATCG TAGCGATGGC GGGCGACGGT GTGAACGATG CCCCAGCCCT CGCTGCCGCC GATGTCGGCA TCGCCATGGG TTCGGGAACG GACGTGGCGA TTGAAAGCGC AGGCATCACA CTGCTCAAGG GCGATTTGAC GGGGATAACG CGTGCCCGGC ACCTCAGTCA TGCAACCATG ACCAACATCC GGCAGAACCT GTTCTTCGCC TTTGCCTACA ACGTCGCTGG TATCCCGGTG GCTGCAGGCG CGCTCTACCC GCTGTTCGGC ATCATGCTTT CACCGATCAT CGCAGCGGCG GCGATGGCGC TTTCCTCGGT CAGCGTCATC GGCAATTCGC TGCGTCTCAG GAGGATTGCG CTATGA
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Protein sequence | MTESHHDLAK CTHFGSKAPG TVIDPVCGMS VDPATTPHVA THDGAHHYFC SAGCLAKFKT DPARYMSDAP RPTEYVAEGA IWTCPMHPEV QQSGPGSCPI CGMALEPMAP TLSDGPSPEY ADMKRRFVIG LILALPVVAL EMGGHLTGLR HYLDGNIASL IQMVLATPVV LWAGWPFFER GWASVKSGHL NMFTLIAMGT GVAWMYSMAA TLAPSMFPPA FRAMDGSVAV YFEAAAVITV LVLLGQLLEL RARETTSGAI RALLDLSPKL ARRVRPDSSD EEITLDQVLV GDTLRVRPGE KVPVDGVVLE GRGTVDESMV TGESMPVTKE ASSKLIGGTI NQTGGLVMRA EKIGRDTMLA RIVQMVAEAQ RSRAPIQRLA DTVSGWFVPA VIAVAAVAFA AWSLVGPSPA MGYGLIAAVA VLIIACPCAL GLATPMSIMV GVGRGAQAGI LIKNAEALER MEKVDTLVVD KTGTLTEGKP AVVAIETAEG FDSQEVLRLA ASLERSSEHP LALAIVRDAE AKGLAISEPG DVDQPVGKGI TGIVDGYRLV AGNARFLEEQ GISTAQLAQR ADALRAEGAT AIFLGIDGQV AGSIGIADPV KATTPAALKA LAEVGIHVIM LTGDNRVTAE AIARRLGIAD VEADVLPDQK SAIVKRLRDE GRIVAMAGDG VNDAPALAAA DVGIAMGSGT DVAIESAGIT LLKGDLTGIT RARHLSHATM TNIRQNLFFA FAYNVAGIPV AAGALYPLFG IMLSPIIAAA AMALSSVSVI GNSLRLRRIA L
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