45 homologs were found in PanDaTox collection
for query gene YPK_1547 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_1547  phosphotransferase system lactose/cellobiose-specific IIB subunit  100 
 
 		 95 aa  185  1e-46  Yersinia pseudotuberculosis YPIII  Bacteria  hitchhiker  0.00223211  n/a   
 
 
-
 
NC_010159  YpAngola_A0343  PTS system lactose/cellobiose-specific transporter subunit IIB  100 
 
 		 95 aa  185  1e-46  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000259876  normal  1 
 
 
-
 
NC_009708  YpsIP31758_1438  PTS system, lactose/cellobiose specific IIB subunit  100 
 
 		 95 aa  185  1e-46  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000114566  n/a   
 
 
-
 
NC_012917  PC1_3549  phosphotransferase system lactose/cellobiose-specific IIB subunit  85.26 
 
 		 95 aa  162  2.0000000000000002e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_2056  phosphotransferase system, lactose/cellobiose-specific IIB subunit  84.21 
 
 		 95 aa  157  5e-38  Psychromonas ingrahamii 37  Bacteria  normal  0.615056  normal  0.200846 
 
 
-
 
NC_013457  VEA_000772  hypothetical protein  76.84 
 
 		 95 aa  141  3e-33  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011313  VSAL_II0823  PTS system, lactose/cellobiose specific IIB subunit  47.73 
 
 		 89 aa  82.4  0.000000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.479852  n/a   
 
 
-
 
NC_013517  Sterm_3367  phosphotransferase system lactose/cellobiose- specific IIB subunit  45.35 
 
 		 89 aa  76.3  0.0000000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK2663  sugar phosphotransferase component II B  44.94 
 
 		 89 aa  75.1  0.0000000000003  Bacillus cereus E33L  Bacteria  normal  0.168546  n/a   
 
 
-
 
NC_009674  Bcer98_2010  phosphotransferase system lactose/cellobiose-specific IIB subunit  46.07 
 
 		 89 aa  74.3  0.0000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000312148  n/a   
 
 
-
 
NC_009436  Ent638_2845  phosphotransferase system, lactose/cellobiose-specific IIB subunit  41.57 
 
 		 90 aa  73.6  0.0000000000009  Enterobacter sp. 638  Bacteria  hitchhiker  0.0026966  normal  0.681011 
 
 
-
 
NC_003909  BCE_2982  PTS system, lactose/cellobiose specific IIB subunit  44.94 
 
 		 89 aa  73.6  0.000000000001  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000466045  n/a   
 
 
-
 
NC_011205  SeD_A2692  PTS system lactose/cellobiose-specific IIB subunit  40.66 
 
 		 90 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.621712 
 
 
-
 
NC_011149  SeAg_B2484  phosphotransferase system, lactose/cellobiose-specific IIB subunit  40.66 
 
 		 90 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000665706  n/a   
 
 
-
 
NC_011094  SeSA_A2572  phosphotransferase system, lactose/cellobiose-specific IIB subunit  40.66 
 
 		 90 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0697836  normal  0.670538 
 
 
-
 
NC_011083  SeHA_C2584  PTS system lactose/cellobiose-specific IIB subunit  40.66 
 
 		 90 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.267294  normal  1 
 
 
-
 
NC_011080  SNSL254_A2529  PTS system lactose/cellobiose-specific transporter subunit IIB  40.66 
 
 		 90 aa  73.2  0.000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0712535  normal  0.400159 
 
 
-
 
NC_008261  CPF_0502  PTS system, lactose/cellobiose-specific IIB component  39.33 
 
 		 90 aa  72.4  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.191208  n/a   
 
 
-
 
NC_012793  GWCH70_1409  phosphotransferase system lactose/cellobiose-specific IIB subunit  37.08 
 
 		 92 aa  70.1  0.00000000001  Geobacillus sp. WCH70  Bacteria  normal  0.661644  n/a   
 
 
-
 
NC_008262  CPR_0490  penitol PTS system enzyem IIB component  38.2 
 
 		 90 aa  68.9  0.00000000002  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_0389  phosphotransferase system lactose/cellobiose-specific IIB subunit  38.95 
 
 		 94 aa  69.3  0.00000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_0379  phosphotransferase system, lactose/cellobiose-specific IIB subunit  38.95 
 
 		 94 aa  69.3  0.00000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_0779  phosphotransferase system lactose/cellobiose-specific IIB subunit  56.14 
 
 		 90 aa  68.9  0.00000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.897139  n/a   
 
 
-
 
NC_013515  Smon_1149  phosphotransferase system lactose/cellobiose- specific IIB subunit  42.35 
 
 		 88 aa  67.4  0.00000000006  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2932  phosphotransferase system lactose/cellobiose-specific IIB subunit  33.33 
 
 		 94 aa  64.3  0.0000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013203  Apar_0171  phosphotransferase system lactose/cellobiose- specific IIB subunit  38.37 
 
 		 94 aa  61.6  0.000000004  Atopobium parvulum DSM 20469  Bacteria  normal  0.430565  normal  1 
 
 
-
 
NC_013517  Sterm_2490  phosphotransferase system lactose/cellobiose- specific IIB subunit  36.26 
 
 		 89 aa  61.2  0.000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.206391  n/a   
 
 
-
 
NC_004116  SAG0197  PTS system, IIB component, putative  35.11 
 
 		 94 aa  60.5  0.000000008  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_2257  phosphotransferase system lactose/cellobiose-specific IIB subunit  34.04 
 
 		 104 aa  59.7  0.00000001  Serratia proteamaculans 568  Bacteria  normal  0.74172  hitchhiker  0.0000885847 
 
 
-
 
NC_010320  Teth514_0239  phosphotransferase system, lactose/cellobiose-specific IIB subunit  31.46 
 
 		 99 aa  58.5  0.00000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_1285  phosphotransferase system lactose/cellobiose- specific IIB subunit  35.56 
 
 		 99 aa  58.2  0.00000004  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_1955  phosphotransferase system lactose/cellobiose-specific IIB subunit  32.61 
 
 		 97 aa  57  0.00000008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.876388  n/a   
 
 
-
 
NC_013421  Pecwa_2251  phosphotransferase system lactose/cellobiose-specific IIB subunit  31.52 
 
 		 97 aa  55.5  0.0000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.470891  n/a   
 
 
-
 
NC_008527  LACR_1736  phosphotransferase system, galactitol-specific IIB component  36.17 
 
 		 99 aa  55.8  0.0000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.251626  n/a   
 
 
-
 
NC_013517  Sterm_0143  phosphotransferase system lactose/cellobiose- specific IIB subunit  38.71 
 
 		 92 aa  51.6  0.000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.152358  n/a   
 
 
-
 
NC_013517  Sterm_3189  phosphotransferase system lactose/cellobiose- specific IIB subunit  30.43 
 
 		 90 aa  49.3  0.00002  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.728848  n/a   
 
 
-
 
NC_007633  MCAP_0590  PTS system ascorbate-specific transporter subunits IICB  31.46 
 
 		 602 aa  48.5  0.00003  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG1814  PTS system, IIB component  30.43 
 
 		 92 aa  48.1  0.00004  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_1266  PTS system, Lactose/Cellobiose specific IIB subunit  30.95 
 
 		 89 aa  47  0.00008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0104211 
 
 
-
 
NC_014150  Bmur_2751  phosphotransferase system lactose/cellobiose- specific IIB subunit  34.38 
 
 		 100 aa  46.6  0.0001  Brachyspira murdochii DSM 12563  Bacteria  normal  0.0267952  n/a   
 
 
-
 
NC_008528  OEOE_1482  phosphotransferase system, galactitol-specific IIB component  29.17 
 
 		 99 aa  46.6  0.0001  Oenococcus oeni PSU-1  Bacteria  normal  0.855591  n/a   
 
 
-
 
NC_013517  Sterm_0123  phosphotransferase system lactose/cellobiose- specific IIB subunit  25.51 
 
 		 94 aa  43.1  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_1465  phosphotransferase system lactose/cellobiose- specific IIB subunit  24.14 
 
 		 94 aa  41.2  0.005  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_0646  putative PTS system, ascorbate-specific IIB component SgaB  27.85 
 
 		 96 aa  41.2  0.005  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_013515  Smon_1322  phosphotransferase system lactose/cellobiose- specific IIB subunit  32.22 
 
 		 93 aa  40.4  0.009  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
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