Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1955 |
Symbol | |
ID | 8132898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2246647 |
End bp | 2246940 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644865244 |
Product | phosphotransferase system lactose/cellobiose-specific IIB subunit |
Protein accession | YP_003017532 |
Protein GI | 253688342 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.876388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAG TTCTTTGCGT ATGCGGCTGT GGATTAGGCT CCAGTTTCGC TATCGAAATG AGTGCAAAAT CCGTACTAAA AAAACTGGGC ATTGATGCAG AAATAAATCA CACCACGATT TCAGAAGCCT CTGCCTTCCG CTATGACGTC ATTTTAACGC AGAAAATATT TGCGGATATT CTGACTAGTG ATGCCAATGA GGATGAGAAA AAAAGGATCA TCATTCTTAA TAAATTGACC GACAAAGACG AAATAGAAGA AAAAATCTTA GCGTATATTC AGGCTCATAA ATAA
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Protein sequence | MLKVLCVCGC GLGSSFAIEM SAKSVLKKLG IDAEINHTTI SEASAFRYDV ILTQKIFADI LTSDANEDEK KRIIILNKLT DKDEIEEKIL AYIQAHK
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