Gene PC1_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1955 
Symbol 
ID8132898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2246647 
End bp2246940 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content38% 
IMG OID644865244 
Productphosphotransferase system lactose/cellobiose-specific IIB subunit 
Protein accessionYP_003017532 
Protein GI253688342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.876388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAG TTCTTTGCGT ATGCGGCTGT GGATTAGGCT CCAGTTTCGC TATCGAAATG 
AGTGCAAAAT CCGTACTAAA AAAACTGGGC ATTGATGCAG AAATAAATCA CACCACGATT
TCAGAAGCCT CTGCCTTCCG CTATGACGTC ATTTTAACGC AGAAAATATT TGCGGATATT
CTGACTAGTG ATGCCAATGA GGATGAGAAA AAAAGGATCA TCATTCTTAA TAAATTGACC
GACAAAGACG AAATAGAAGA AAAAATCTTA GCGTATATTC AGGCTCATAA ATAA
 
Protein sequence
MLKVLCVCGC GLGSSFAIEM SAKSVLKKLG IDAEINHTTI SEASAFRYDV ILTQKIFADI 
LTSDANEDEK KRIIILNKLT DKDEIEEKIL AYIQAHK