Gene PC1_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3549 
Symbol 
ID8134529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3997657 
End bp3997944 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content49% 
IMG OID644866850 
Productphosphotransferase system lactose/cellobiose-specific IIB subunit 
Protein accessionYP_003019101 
Protein GI253689911 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CAGTCGTATG CGGTAACGGT CTGGGTACCA GCCTGATGAT GGAAATGAGC 
ATTAAAAACA TCGTGAAAGA ACTCGGCGTG GTTGCTGATG TGGATCACGT GGATTTAGGT
TCGGCGAAAG GCACGGACAG CGACATCTTT GTCGGTACCA AAGATATTGC CGATCAGCTC
ATCGCGCAGG CGGTGGGAGG GAAAATTGTG TCCCTGAATA ACATGATCGA CAAAGTGGCG
ATGAAAGAAC GCCTGTCGGT CGCCCTGACA GAACTTGGCG CTTTATAA
 
Protein sequence
MKITVVCGNG LGTSLMMEMS IKNIVKELGV VADVDHVDLG SAKGTDSDIF VGTKDIADQL 
IAQAVGGKIV SLNNMIDKVA MKERLSVALT ELGAL