| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1285 |
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| Symbol | |
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| ID | 8414165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1443271 |
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| End bp | 1443570 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022877 |
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| Product | phosphotransferase system lactose/cellobiose- specific IIB subunit |
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| Protein accession | YP_003180300 |
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| Protein GI | 257785083 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA AGAAGTTCCA CGCACTGGTT TGCTGCCGTG CAGGTATGGG CTCTTCCATG
ATGCTCAAGA TCAAGATTGA TCAGGTCATT AAAGAGAATG ATCTTCCAAT CGAGACTGAG
CACGGTAATT TGGATTCACT GATTGGTTTC AATGGCGATC TTGTTATCAC TATGTCTGAT
CTTACTGACG AGCTCAACGC TGACGAACGC GTTCCTTCTG CAGTTGGCAT CACCAACATT
GTTGATAAGG CAGAGATGAA GGAGAAGCTC ACCGCTTGGC TCGCAGAGCA CAACGCATAA
|
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| Protein sequence | MADKKFHALV CCRAGMGSSM MLKIKIDQVI KENDLPIETE HGNLDSLIGF NGDLVITMSD
LTDELNADER VPSAVGITNI VDKAEMKEKL TAWLAEHNA
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