Gene YpsIP31758_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1438 
Symbol 
ID5387164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1677315 
End bp1677602 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID640864421 
ProductPTS system, lactose/cellobiose specific IIB subunit 
Protein accessionYP_001400417 
Protein GI153950545 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000114566 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CAGTGGTCTG TGGTAACGGT TTAGGAACCA GTTTGATGAT GGAAATCAGC 
ATCAAAAGTA TCCTGAAAGA ATTAGCCGTC AGTGCTGAAG TCGATCATGT TGACCTCGGT
TCCGCAAAAG GTACGCCAAG CGATATCTTT ATCGGTACCA AAGACATTGC AGAGCAATTA
GTTGCTCAAG CAGTGGGTGG CAAAATCGTT GCATTGGATA ACATGATCGA TAAGAAAGCC
ATGAAAGAGC GCTTATCTGC AGCATTAACC GAACTAGGCG CTTTGTAA
 
Protein sequence
MKITVVCGNG LGTSLMMEIS IKSILKELAV SAEVDHVDLG SAKGTPSDIF IGTKDIAEQL 
VAQAVGGKIV ALDNMIDKKA MKERLSAALT ELGAL