| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1266 |
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| Symbol | |
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| ID | 8708889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1513275 |
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| End bp | 1513544 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483354 |
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| Product | PTS system, Lactose/Cellobiose specific IIB subunit |
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| Protein accession | YP_003374456 |
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| Protein GI | 283783702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0104211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TATGTGTATG CGGAAACGGC ATTGGCACGT CTGTACTTTT AAAAATCAAT
GTTGAGGCTG CGGCAGCAGA CTTAGGTCTT GATGTTACAG TTACTACTTC CGATGCTGGA
AGTGCAAAAG GTACTGCCAA TATGAATGAT CTTGTGCTCA CTTCTCCTCA GCTTGCTCCA
GAGCTTGAGG GCACTACCAC TCCTGTAGAA ACAATTGAAA ATTTCATGGA TGTTGAAGAG
GTGAAGGGTG TGCTTGAGCG TTACGCATAA
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| Protein sequence | MNILCVCGNG IGTSVLLKIN VEAAAADLGL DVTVTTSDAG SAKGTANMND LVLTSPQLAP
ELEGTTTPVE TIENFMDVEE VKGVLERYA
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