Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1547 |
Symbol | |
ID | 6088711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1708794 |
End bp | 1709081 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641596617 |
Product | phosphotransferase system lactose/cellobiose-specific IIB subunit |
Protein accession | YP_001720293 |
Protein GI | 170023788 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00223211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA CAGTGGTCTG TGGTAACGGT TTAGGAACCA GTTTGATGAT GGAAATCAGC ATCAAAAGTA TCCTGAAAGA ATTAGCTGTC AGTGCTGAAG TCGATCATGT TGACCTCGGT TCCGCAAAAG GTACGCCAAG CGATATCTTT ATCGGTACCA AAGACATTGC AGAGCAATTA GTTGCTCAAG CAGTGGGTGG CAAAATCGTT GCATTGGATA ACATGATCGA TAAGAAAGCC ATGAAAGAGC GCTTATCTGC AGCATTAACC GAACTAGGCG CTTTGTAA
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Protein sequence | MKITVVCGNG LGTSLMMEIS IKSILKELAV SAEVDHVDLG SAKGTPSDIF IGTKDIAEQL VAQAVGGKIV ALDNMIDKKA MKERLSAALT ELGAL
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