Gene YPK_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1547 
Symbol 
ID6088711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1708794 
End bp1709081 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID641596617 
Productphosphotransferase system lactose/cellobiose-specific IIB subunit 
Protein accessionYP_001720293 
Protein GI170023788 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00223211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CAGTGGTCTG TGGTAACGGT TTAGGAACCA GTTTGATGAT GGAAATCAGC 
ATCAAAAGTA TCCTGAAAGA ATTAGCTGTC AGTGCTGAAG TCGATCATGT TGACCTCGGT
TCCGCAAAAG GTACGCCAAG CGATATCTTT ATCGGTACCA AAGACATTGC AGAGCAATTA
GTTGCTCAAG CAGTGGGTGG CAAAATCGTT GCATTGGATA ACATGATCGA TAAGAAAGCC
ATGAAAGAGC GCTTATCTGC AGCATTAACC GAACTAGGCG CTTTGTAA
 
Protein sequence
MKITVVCGNG LGTSLMMEIS IKSILKELAV SAEVDHVDLG SAKGTPSDIF IGTKDIAEQL 
VAQAVGGKIV ALDNMIDKKA MKERLSAALT ELGAL