Gene SNSL254_A2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2529 
Symbol 
ID6484968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2455306 
End bp2455578 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content47% 
IMG OID642737864 
ProductPTS system lactose/cellobiose-specific transporter subunit IIB 
Protein accessionYP_002041605 
Protein GI194446664 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0712535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.400159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TGGCAATTTG CGGTTCCGGC CTGGGTAGTA GTTTTATGGT AGAAATGAAC 
ATTAAAAAAG TATTAAAGAA ACTCAATATT GACGCTGAAG TGGAACACTC CGATCTTTCA
TCGGCCACGC CCGGGGCTGC CGATCTTTTT GTAATGGCCA AAGATATCGC GGCCAGCGCC
AGCGTACCGG AAAGCCAACT GGTGGTGATC AATAACATCA TCGACATCAA CGAACTGGAA
ACGCAGCTGC GCGCATGGTT CGCTAAACAA TAA
 
Protein sequence
MKIMAICGSG LGSSFMVEMN IKKVLKKLNI DAEVEHSDLS SATPGAADLF VMAKDIAASA 
SVPESQLVVI NNIIDINELE TQLRAWFAKQ