7 homologs were found in PanDaTox collection
for query gene Vapar_1353 on replicon NC_012791
Organism: Variovorax paradoxus S110



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_1353  secreted pectate lyase-family protein  100 
 
 		 603 aa  1246    Variovorax paradoxus S110  Bacteria  normal  0.633554  n/a   
 
 
-
 
NC_010338  Caul_1698  hypothetical protein  48.39 
 
 		 547 aa  502  1e-141  Caulobacter sp. K31  Bacteria  normal  0.498115  normal  0.0888224 
 
 
-
 
NC_009441  Fjoh_4248  pectate lyase  23.99 
 
 		 666 aa  68.9  0.0000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.38518  n/a   
 
 
-
 
NC_009441  Fjoh_4116  pectate lyase  23.9 
 
 		 396 aa  65.5  0.000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.275233  n/a   
 
 
-
 
NC_011898  Ccel_1245  pectate lyase  20.71 
 
 		 552 aa  61.2  0.00000005  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_3779  pectate lyase  23.89 
 
 		 350 aa  59.7  0.0000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1051  Serine O-acetyltransferase  24.31 
 
 		 700 aa  45.8  0.002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>