| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4116 |
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| Symbol | |
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| ID | 5094026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 4947587 |
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| End bp | 4948777 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644743535 |
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| Product | pectate lyase |
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| Protein accession | YP_001196443 |
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| Protein GI | 146301852 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.275233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TCAATAGTTC AAAAGCAGTT GTTGTAAGTC TTTGTGCTTT TTCGTTTCTA
CATTCAAATG CGCAGACTAA CAAAGAGGAA AAATCACTAA TCAGCACCAA AGTTTTTACT
GACGGCACCA ACCATTGGTA CCACATTAAA GATAAAACGA ATATCGTAAA TCCGATTCCA
AATCAGCCTC AATATGCTGA AACGGATTAT GCGAAAATCG CTGATAATAT TTTGCTTTTT
CAGCGTAATA ATGGCGGATG GCCAAAGAAT TACGATATGA AAGCAATTCT GACTCCAAAG
CAAATCGATA CGGTTATTAA AACAAAACCA ATTCTGCATA CAACTTTTGA CAATGAAACA
ACTTACACAC ATGTCAATTA TCTGGCTCAG GTTTATACTT TGACCAAAGA CGCTAAATAT
AAAGACGGCG CGTTAAAAGG AATTGATTTT ATCATGGAAG CTCAATACGG CAACGGAGGC
TGGCCTCAAT ATTATCCACT GGAAAAAGGG TACAGCCGAC ATATTACATT TAATGACGGC
GCTTATATGG GCATCATGAA TCTTTTGAAA AAGATTGTAA ACAATGATCC TGATTTTGAA
TTTATTGATA TTAAAACCCG AAAAAAAGTA ACGGCGTCTT ACGAAAAAGG CATTGATTGT
ATTTTAAAAA TGCAGATTAA AGAAGATGAA AAATTAACCG CCTGGTGTCA GCAGCATGAT
GAAATTACGC TTTTACCAGC GTGGGCACGA AAATTTGAAC CGCCAAGTAT CTGTAATGCA
GAAAGTGTTG ATATTGTACT GTTTTTAATG GCAATCGATA ATCCGAATGA AAAAATAATT
GCTTCGGTGC AAGGTGCTGT AAAATGGTTT CAGGATTCTA AAATTTACAA TACAAGGGTT
GAAAGTTTTC AGGCTCCGGA AATGGAATCT AAATACAAAA AAATCACTAA TGATGTTCGT
GTAGTAACTG ATACTGCTGC ACCGCCAATC TGGACGAGAT ATTACGAATT AGGAACTCAT
AAACCTTTAT TCTCAGATAG AAACAGTGAA CTTTTGTATT CGCTTGCAGA AGTAAGCCGA
GAGCGCAGAA GCGGTTATGC ATGGTATACG GATAAACCGG AAAAAGCATT GAAAAAATAT
CCGGCCTGGC AGAAGAAATG GGATTCTGGA AATGATGTTT TGAAGAACTA G
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| Protein sequence | MKFINSSKAV VVSLCAFSFL HSNAQTNKEE KSLISTKVFT DGTNHWYHIK DKTNIVNPIP
NQPQYAETDY AKIADNILLF QRNNGGWPKN YDMKAILTPK QIDTVIKTKP ILHTTFDNET
TYTHVNYLAQ VYTLTKDAKY KDGALKGIDF IMEAQYGNGG WPQYYPLEKG YSRHITFNDG
AYMGIMNLLK KIVNNDPDFE FIDIKTRKKV TASYEKGIDC ILKMQIKEDE KLTAWCQQHD
EITLLPAWAR KFEPPSICNA ESVDIVLFLM AIDNPNEKII ASVQGAVKWF QDSKIYNTRV
ESFQAPEMES KYKKITNDVR VVTDTAAPPI WTRYYELGTH KPLFSDRNSE LLYSLAEVSR
ERRSGYAWYT DKPEKALKKY PAWQKKWDSG NDVLKN
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