| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3779 |
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| Symbol | |
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| ID | 9140497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4858264 |
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| End bp | 4859316 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | pectate lyase |
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| Protein accession | YP_003631790 |
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| Protein GI | 296124012 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTTC GATGCGGGCT CATCATCGCT GCGTTGCTGC TGGTCGCTCA AATCGCGGAT
GCTCGGCCGA AGGATTTTCT TAAGAAGAGC GATGCCTGGT TTGCGGGAGA CGAGGCACAG
CGAATTGCGA AAAGTATTCT CTCGTTCCAG AGTGAAACCG GCGGCTGGCC CAAGAATGTT
GATACAACGG CCGCTCGCTA TACCGGCGAT CGCTCACAGC TCAAAGGGAC TTACGATAAC
GGAGCGACGA CCGATGAATT GCGATTTCTG GCTCGTATCT ATAAGGCCAC AAAAGATTCC
AAGTACCACC AGTCGTTTGA CCGTGGCCTC GCATACATCC TGAAAGGGCA ATACCAGAAC
GGCGGCTGGC CCCAATTCTC ACCGCCGGGT GCGGGCTATC ATCGCCATAT CACATTCAAT
GATGGTGCGA TGGTGCGTCT GCTCGAATTC CTGCGGGAAG TCGCGACAGC AGATCGATAC
GAGTTCGTCG ATGACCATCG CCGCCAGGCG GCAACCATTG CTGTGAGCCG GGGAATCGAC
TGCATTCTCA AGTGTCAGAT CCGGGTTGAG GGCACATTGA CAGTCTGGTG CGCGCAGCAC
GACGAAATCG ACTTTCGCCC ACAGCCTGCG AGAACGTTTG AACTGGCAAC GCTCAGCGGG
TGCGAATCGG CAGGAATCAC CCGCTTTCTG ATGAGCATTG ATGATCCATC GCCCGAGATT
GTGCAGTCTG TGGATGCCGC GATCGCGTGG TTCGAGCGAT CAAAACTCAC AGGCATTCGC
GTGGCCACCG AGAAAGACAA GAAAGGCCCC GAAGGGATCA ATCGAGTGGT GGTGGCTGAT
GAACATGCTC CTCCGCTATG GGCTCGTTTC TACCAGATCG AGACCAATCA GCCGGTCTTC
GTTGATCGCG ACGGGATTCC TAAAGCGACG CTGGCTGAGA TTGGCTACGA ACGACGCAAT
GGCTACGCCT GGTACGGCAC CTGGCCGCAA AAACTCCTGA GCGATGATTA CCCCAAATGG
AGGCGGAAAA TCTCGCTCAA AGTGAGTTCA TAG
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| Protein sequence | MIFRCGLIIA ALLLVAQIAD ARPKDFLKKS DAWFAGDEAQ RIAKSILSFQ SETGGWPKNV
DTTAARYTGD RSQLKGTYDN GATTDELRFL ARIYKATKDS KYHQSFDRGL AYILKGQYQN
GGWPQFSPPG AGYHRHITFN DGAMVRLLEF LREVATADRY EFVDDHRRQA ATIAVSRGID
CILKCQIRVE GTLTVWCAQH DEIDFRPQPA RTFELATLSG CESAGITRFL MSIDDPSPEI
VQSVDAAIAW FERSKLTGIR VATEKDKKGP EGINRVVVAD EHAPPLWARF YQIETNQPVF
VDRDGIPKAT LAEIGYERRN GYAWYGTWPQ KLLSDDYPKW RRKISLKVSS
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