| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4248 |
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| Symbol | |
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| ID | 5092290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 5126741 |
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| End bp | 5128741 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644743672 |
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| Product | pectate lyase |
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| Protein accession | YP_001196575 |
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| Protein GI | 146301984 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4677] Pectin methylesterase |
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| TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.38518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGT TAAAAAAAAT CATATTACTT TTTAGTATTG CTTTGAGTTT TAGCATCCAG
GCACAGAATA CATATAAAAA CTGGTCGGAT ATAATTCGTA AAAGTGATGC ATCATGGTTT
GGCAGTGATG AAGCTAAAAA GATTGCCGAA AATGTACTGC TTTATCAAAG AGATATTGGC
GGATGGCCAA AAAACATTCA AATGCAGAAT GAACTGACTC CTGCGCAAAA AAAGGATCTG
CTTGAAATTA AAAAGACCAC AAAGGAAACC ACAACAGACA ACGGAGCAAC GACTCAGGAA
ATGCTCTTTA TGTCTAAAAT GTATGCTCAG GTAAAAGACG AGCGATATAA AGAATCATTT
TTAAAAGGAT TAAATTATTT GCTCGAAGCA CAATATGCAA ATGGAGGCTG GCCTCAGTTT
TATCCATTAA AAAAAGGATA TTATACACAC ATTACTTATA ATGATGATTC GATGATCAAT
ATAATGAATG TGATAAAAGC TGTTGCAGAC GAAACTGATT ATTACAGTAT AAAACCTTCA
AAAGATATTG TAGAAAAGAG TAAAAAAGCT TTTGACAAAG GAATTGACTG TATTTTAAAA
ACACAATACA AGCAAAATGG TATTTTAACA GCGTGGTGTG CGCAGCATGA TGAAGTTACT
TTTGCCCCGG CAAATGCAAG AGCTTTTGAA CTGGCGTCCT TAAGCGGTTA CGAATCAACA
AAAATTGTTT TGCTGTTAAT GGCTGTCGAA AAACCTTCAC GAGAAATAGT CATCGCTGTA
AAAAGTGCTG TTGAATGGTT CGAAAAAACT AAAATTACCA ATTTAGAAGA AAAAAGAGTT
TTAAACGATG CAGGAAAAGT TGTAGACAAA AAAATGATTC CTGCTGTAAA TGCGGGACCA
ATTTGGGCTC GGTTTATGGA TTTAGAAACT AACGAACCTT TTTTCTGTGA TCGTGACGGC
ATTAAAAAGA AGTCAATAGA TCAAATTGGC GCCGAAAGAC GAAACGGTTA TTCATGGTAT
ACAGACGCGC CAAAAGAAGT CTTAAAGAAA TTTCCAGACT GGGCAGTTAA AAATGGTACA
AAAGTTTCAG CTTCTGAAAA GAAAAATGTC AGTCTAATTA CAGTTGCTCA GGATGGATCA
GGAGATTTTA CTAAAATACA AGATGCAGTG TATGCCTGTC CGGCATTTCC TTATGAGAAA
GTCACAATTT ATGTGAAAAA CGGAGTTTAC AATGAAAAAG TCCGAATTCC GGAATGGAAT
AATAATGTGA TTTTAAAAGG CGAAAGCAAA GAGAATACTA TCATTACTTT TGATGATAAT
TTTTCAAAAA TCAATTTAGG ACGAAACAGT ACTTTTTATA CATCAACGCT TTTAGTAGAA
GGAGATGATT TTTCAGCATC TAACTTAACT CTCAAAAATG CTTCAGGCGA TAAAGGACAA
GCAATAGCCT TATCTGTTAC CGGAACTCGC GCTAAAATTT CCAACTGTAC TATTTTAGGA
AATCAGGATA CCTTATACTT ATCAGGAAAA AATGCAAAGC AGTACTTTAA AGACTGCTAT
ATAGAAGGTA CAACCGATTT TATCTTTGGA GGTGCTACAG CCTTATTTGA AAATTGTATC
ATTCACAGTA TTAAAAGTTC GTATGTTACA GCAGCTTCAA CTCCTGAAGG AGTAGATTTC
GGTTTTGTTT TTAAGAACTG TAAACTAACC GCTGAAACTG CAGCAAATGC AGTCTATCTA
GGACGACCAT GGCGCATTTA TGCTAAAACA GCTTTTATAA ACTGCGAATT AGGTAAACAA
ATTAAACCTG AAGGCTGGGA AAACTGGTCA AAACCAGATG CAGAGAAAAA TACCTTTTAT
GCCGAATATA ATAACAGCGG AGAAGGATTT CAGCCAAAGA AAAGAGTAAC ATGGTCACAT
CAGCTTACCA AAAAGGAAGC CGATAAATAT TCAATAGAAA ATATCTTAAA AGATACAGTG
GCAAATTGGT ATTCTAATTA A
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| Protein sequence | MIQLKKIILL FSIALSFSIQ AQNTYKNWSD IIRKSDASWF GSDEAKKIAE NVLLYQRDIG
GWPKNIQMQN ELTPAQKKDL LEIKKTTKET TTDNGATTQE MLFMSKMYAQ VKDERYKESF
LKGLNYLLEA QYANGGWPQF YPLKKGYYTH ITYNDDSMIN IMNVIKAVAD ETDYYSIKPS
KDIVEKSKKA FDKGIDCILK TQYKQNGILT AWCAQHDEVT FAPANARAFE LASLSGYEST
KIVLLLMAVE KPSREIVIAV KSAVEWFEKT KITNLEEKRV LNDAGKVVDK KMIPAVNAGP
IWARFMDLET NEPFFCDRDG IKKKSIDQIG AERRNGYSWY TDAPKEVLKK FPDWAVKNGT
KVSASEKKNV SLITVAQDGS GDFTKIQDAV YACPAFPYEK VTIYVKNGVY NEKVRIPEWN
NNVILKGESK ENTIITFDDN FSKINLGRNS TFYTSTLLVE GDDFSASNLT LKNASGDKGQ
AIALSVTGTR AKISNCTILG NQDTLYLSGK NAKQYFKDCY IEGTTDFIFG GATALFENCI
IHSIKSSYVT AASTPEGVDF GFVFKNCKLT AETAANAVYL GRPWRIYAKT AFINCELGKQ
IKPEGWENWS KPDAEKNTFY AEYNNSGEGF QPKKRVTWSH QLTKKEADKY SIENILKDTV
ANWYSN
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