| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1245 |
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| Symbol | |
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| ID | 7310040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1538857 |
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| End bp | 1540515 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643608166 |
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| Product | pectate lyase |
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| Protein accession | YP_002505581 |
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| Protein GI | 220928672 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAA AAACAAGATC TCAAATCCCA AAGGTTTTAT TAATAACAAT GCTGGTCTCG
GTTTTTTCTT TAATTCTACT ATTTCCAAAA CATGCATTTG CTTCAACCCC GGATTGGAAG
AGTGTACTTA AAAATTCAGA CTCATGGTTT GGCAGTTCAG AGGGAATTGC ACTAGCAGAC
AGTATAGTCA AGTACCAGCT TGCAGACGGA GGCTGGAGAA AGGACATGAC AACAAGTACC
AGCGGGTCAT GGGGCAAATC TACCATAGAT AATGATACAA CTACTTCTCA AATAAAAGTT
CTGGCGAAAA CATACAATCA AACAAAAAAC ACTAAATATC TCACTTCGTG TCAAAAGGGC
ATTGACCTTT TACTGAACGG ACAGTACTCA AATGGCGGCT GGCCACAGGT ATTCAATGAT
GCCGGAACGT ATCATGCACA CATTACCTAC AATGACAATG CCATGATTCA TGTCATGAAC
TTATTGACCG ATGTTTCAAA AAAGTCAGGG GATTACACCT TTATTGATTC AACCAGAGCT
TCAAAAGCAG GCGGTGCTGT TCAAAAAGGT ATTCAGTGTA TATTAAATAC ACAAATTATT
GTAAATGGTA TAAAAACCGC GTGGTGTCAG CAGCATGATG AATTAACTCT GAAACCTACC
AGTGGAAGGG CCTATGAATT GCCCTCTATT TGCACCAGTG AGAGTGTGGG CATAGTAAAC
TACTTAAAAG GAATCAGCAA CCCCAGCACT GAGATAACAA ACGCCATCAA TTCTGCCGTT
AACTGGTTTG CACAGGTTAA AATACTAGGG ATTAAAGTAG TTGACACTGG AGATGACAGA
ATAGTTGTCA GCGATTCTCA AGCACCGCCT ATATGGGCCC GCTTTTATGA AATGGGTACT
AATAGGGCGA TGTTCGTTGA CCGTGACGGC TCCATTCATT ATCAAATGTC AGAAATTAGT
CAGGAAAGAA GAGATGGTTA TGATTGGTAT GGTGATTGGC CCAAAAACCT TGTTAAAGAT
ACCGTTATAC CCACACCTAT TCCCGATGGT CAATATATAA AATCTTTGAT AGTAAGCGAC
ACGGATAATG CCGCAGACTG GTCTATTCAG ACCAATTTAC AGGTAGGAGA TACAATATAT
GGAGACAGAA CCTTCAAAGT TGTTCAAATT CCCCAAAGCC TTGCAGGTGC TGAATGGATA
AGAACAGCAT GCGATTCAAA ACTATACACC TCAGATGAAG CCTCCTTTAC TGCAAAATCG
GATATAACTG TTTATGCGGC CCTAGACACA AGAGTTACCA GCATACCTGC CTGGTTTGGC
AGCTGGACCA AAACCGACGA AACATTAAGT ACAGATAATG CCGTTACATA TAATATTTAT
AAAAAGGATT TTACTACCGG TTCAAGCGTG GTACTTGGAA CTAACGGGGC ATCCTCAAGT
GTAGTGAATT ACACCGTGAT GGTAAAGCCT AAATCCATAA TTCTCAAAGG TGACGTAAAT
GGAGATGGGG CAGTAGATGC TTTGGATTTT GCACTTGTAA AGAGGTACTT ACTGAATGGA
GTAACTGATG GAATGAATTT ACAGGCAGCA GATATGAATA ATGATAATTC CGTAAATGCA
ATCGATCTGG CACTCATTAG AGGTGATATT TTGTACTGA
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| Protein sequence | MITKTRSQIP KVLLITMLVS VFSLILLFPK HAFASTPDWK SVLKNSDSWF GSSEGIALAD
SIVKYQLADG GWRKDMTTST SGSWGKSTID NDTTTSQIKV LAKTYNQTKN TKYLTSCQKG
IDLLLNGQYS NGGWPQVFND AGTYHAHITY NDNAMIHVMN LLTDVSKKSG DYTFIDSTRA
SKAGGAVQKG IQCILNTQII VNGIKTAWCQ QHDELTLKPT SGRAYELPSI CTSESVGIVN
YLKGISNPST EITNAINSAV NWFAQVKILG IKVVDTGDDR IVVSDSQAPP IWARFYEMGT
NRAMFVDRDG SIHYQMSEIS QERRDGYDWY GDWPKNLVKD TVIPTPIPDG QYIKSLIVSD
TDNAADWSIQ TNLQVGDTIY GDRTFKVVQI PQSLAGAEWI RTACDSKLYT SDEASFTAKS
DITVYAALDT RVTSIPAWFG SWTKTDETLS TDNAVTYNIY KKDFTTGSSV VLGTNGASSS
VVNYTVMVKP KSIILKGDVN GDGAVDALDF ALVKRYLLNG VTDGMNLQAA DMNNDNSVNA
IDLALIRGDI LY
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