9 homologs were found in PanDaTox collection
for query gene Swit_1896 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009511  Swit_1896  xylose isomerase domain-containing protein  100 
 
 		 341 aa  698    Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_3328  Xylose isomerase domain protein TIM barrel  34.6 
 
 		 346 aa  170  3e-41  Spirosoma linguale DSM 74  Bacteria  normal  0.273118  normal  1 
 
 
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NC_013037  Dfer_0286  Xylose isomerase domain protein TIM barrel  33.44 
 
 		 335 aa  147  2.0000000000000003e-34  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.433655  normal  1 
 
 
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NC_013132  Cpin_4669  Xylose isomerase domain protein TIM barrel  25.33 
 
 		 284 aa  55.5  0.000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.104946  hitchhiker  0.000000014237 
 
 
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NC_013061  Phep_3140  Xylose isomerase domain protein TIM barrel  23.12 
 
 		 310 aa  49.3  0.0001  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_3955  xylose isomerase domain-containing protein  29.73 
 
 		 276 aa  48.1  0.0002  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00177251  n/a   
 
 
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NC_013172  Bfae_17470  sugar phosphate isomerase/epimerase  29.81 
 
 		 325 aa  46.6  0.0007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.105049  n/a   
 
 
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NC_013131  Caci_1717  Xylose isomerase domain protein TIM barrel  29.67 
 
 		 275 aa  45.4  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.393807 
 
 
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NC_013037  Dfer_3436  Xylose isomerase domain protein TIM barrel  21.39 
 
 		 288 aa  43.9  0.004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
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