| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4669 |
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| Symbol | |
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| ID | 8360843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5828095 |
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| End bp | 5828949 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966820 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003124307 |
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| Protein GI | 256423654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.104946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000014237 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAAA AATTGAGCAG CGTGCTGTTC CTGGCCGGTG TATTGGCCGG AGCGACGATG
ACATCCACGT TAAGTTTTGC GCAGGGAAAA GCCGCCGATA AGCTGGGCTG GAAATTAGGA
GCACAAGCTT ATACCTTTAA CCGTTTTACA TTGGGACAAG CCCTTGAAAA GATGGATAGC
GCGGGTATTG AGTATGTGGA GTGTTATAAC GGTCAGACGA TCGGGGATGG CATTGATGGC
AAATTCGACT GGAGAATGGA TGCCGCAAAG CAGGCGGAAG TAAAAGCTAT GTTTAAGGCA
AAAAAGAAGA AACTGGTGGC TTATGGCGTA GTATCGCCGG CCAGCGAACT GGAATGGGAG
CAGGTGTTTA AATTCGCGAA ATCTATGGGC ATCCAGGTGA TCACTGCGGA GCCTAAACGC
GAGCATTGGG ATGCAGTATC TGCATTGTGT GATAAATACA AGATTAAGGT AGCAATTCAC
GACCATCCGA AACCAAGTCA TTACTGGCAT CCCGATAGCG TACTGGTCGC GATTCAGGGA
CGCAGTAAGT ACATGGGCGC CTGTGCGGAT ATCGGTCACT GGGTACGTTC TGGCATGGAG
CCGGTTGATT GTATTAAACA GCTGAAGGGG CATGTATTGC ACCTGCATTT CAAAGACCTG
AATGAGAAAT CCCGCGATGC GCATGACGTG ATCTGGGGTA ATGGTGTTTG TAATATGCCT
GCTGTACTGG CTGAGCTGAA AGCACAGGGC TTTAAGGGCA TGTTCTCTGT AGAATATGAG
TATAACTGGG ATAACAGCGT ACCGGATGTG AAAGAGAGCG TAAAGTTCTG GTGGGACCAG
GTAGGAAAAT TATAA
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| Protein sequence | MIKKLSSVLF LAGVLAGATM TSTLSFAQGK AADKLGWKLG AQAYTFNRFT LGQALEKMDS
AGIEYVECYN GQTIGDGIDG KFDWRMDAAK QAEVKAMFKA KKKKLVAYGV VSPASELEWE
QVFKFAKSMG IQVITAEPKR EHWDAVSALC DKYKIKVAIH DHPKPSHYWH PDSVLVAIQG
RSKYMGACAD IGHWVRSGME PVDCIKQLKG HVLHLHFKDL NEKSRDAHDV IWGNGVCNMP
AVLAELKAQG FKGMFSVEYE YNWDNSVPDV KESVKFWWDQ VGKL
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