| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3140 |
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| Symbol | |
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| ID | 8254258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3748609 |
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| End bp | 3749541 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644936793 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003093398 |
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| Protein GI | 255533026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATATAG CAATAAATTA TTGCTATTTT TCAGAAATTA ATTTTGCATC GTATAACCAA
ATTATGAAAA TAGGCATTAA AGTCCTTACA GGAATAAGTT TAATATTGAT TTTGAGCAAT
TGTAAAAGTA TAAAATCAGG CAATACGGCT TCGGTGTCTA AAAATAATCC GGAAGCTAAA
TTGAGTTGGA AACTCGGTGC GCAGGCCTAT ACCTTTAAGC TGTATACTTT TGCTCAAGCC
TTAAAAAAAA TTGACAGCTG TAAATTAAGC TATGTGGAAG CATTTGCTGG TCAGCAGATT
GGTGGGGGTA TTGAAGGGAA AATGGGGCCT GATATGGATG AGGCTAAAAG GAAAGCAGTT
TTGGAAATGC TGAAAGCAAA CCATGTAAAA ATTATAGCAT TTGGTGTGGT TAGCCCAAAA
AGCGAGGACG AATGGATTAA ACTATTTGAT TTCTGTAAAG CAATGGGTAT TGAAACCATA
ACATCTGAGC CAAATGAACA ATATATGCCC TTGCTTTCAA AATTGACTGA CAAATATCTG
ATCAATCTGG CCATTCACAA CCATCCCAAT CCCTCGCATT ATTGGAATCC TGATGTTGTA
TTGAATGCCA TTAAAGGCCA GAGCAAACGT ATTGGGGCAT GTGCTGATAT AGGCCATTGG
GTACGTTCGG GGCTGGATCC GGTTGATTGT CTTAAGAAAC TGGAAGGCCA TGTGCTGCAT
TCCCATATGA AAGACCTTAA CATCAAAGGA AAGGCTGGAC ATGATGTACA CTGGGGAGAA
GGTGTCGGCA ATATAGCTGG TGTAATTGCT GAGTTGAAAA GGCAAAATTT CAAAGGGGCT
ATTTCTGCAG AGTACGAGTA CAACTGGCAA AGCAATAGTC AGGATGTGGC CCAGAGCGTT
ATAAATTTCC GGAATCTTGT TGCCAAAGAA TGA
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| Protein sequence | MYIAINYCYF SEINFASYNQ IMKIGIKVLT GISLILILSN CKSIKSGNTA SVSKNNPEAK
LSWKLGAQAY TFKLYTFAQA LKKIDSCKLS YVEAFAGQQI GGGIEGKMGP DMDEAKRKAV
LEMLKANHVK IIAFGVVSPK SEDEWIKLFD FCKAMGIETI TSEPNEQYMP LLSKLTDKYL
INLAIHNHPN PSHYWNPDVV LNAIKGQSKR IGACADIGHW VRSGLDPVDC LKKLEGHVLH
SHMKDLNIKG KAGHDVHWGE GVGNIAGVIA ELKRQNFKGA ISAEYEYNWQ SNSQDVAQSV
INFRNLVAKE
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