| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3328 |
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| Symbol | |
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| ID | 8727081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4024783 |
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| End bp | 4025823 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003388137 |
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| Protein GI | 284038207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.273118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC ATGCTTCTCG CCGTAAGTTT TTGGGCACAA CTGCCGCACT GCTCGCCGGA
ACCGCAGCGG GTACCCATAA GCTCTTTGGC GCTCCCGCCT TAATTCGCTC ATTAGGCGAC
AAGCCGAACT CCCTGATCGA CGGTGTGCAG ATTGGTGTCA TCACCTATTC ATTTCGGGAG
ATGCCCGATC AGAGTGCCGA AGCTACTTTA CAGTATGTCC TGGATTCGGG CGTTAGCGCC
ATTGAATTAA TGGGTGGTCC CGCCGAATCA TTTGCCGGTG CTCCAAAAAG CACGGTCGAT
ATGCGGTTGG TGTTCCCACT GATGCGGAAG AAGCGGGAAA ATCAGCCGCT GACGGAGGAT
GAGCAGAAAA TGGTTACCGA AGCCGAAACC CAGATGAAAG CCTACCGGGC TGAGATGACC
AAATGGCGGC TCTCGGTGCC GATGTCGAAG TTTGAGCAGG TGCGTAAGAT GTATAACCAG
GCGGGAGTGC GTATTTATGG CTTCAAGCCC GATACTTTCG GGATGCAGAG TTCGGACGCG
GAAATCGAGT ACGGCCTGCG GGCGGCTAAA ACGCTGGGAG CCAATCAGGT TACGCTGGAG
CATCCCGCCA ACGACGCCCA TACGCTAAAA CTGGGTACCA TGGCCCAAAA ACAGGGCATG
AAAGTGGGCT ATCATGGTCA TGAGCAGCAA ACGCCTACTT TCTGGGATAC CGCCCTGGCG
CAGTCGCCCG CCAATGCGAT GAACTTCGAC CTTGGGCATT ACGTGGCCGC TGGCAATCCA
GACCCCCTTG TATTGATTAA GCAAAAGCAT GATCGCATTG CCAGCATGCA CATCAAAGAC
CGCCAAACGG CCGATCACGG CAAAGGAAAT CTGGTTTGGG GTCAGGGCGA TACGCCTTTG
CTTCAGGTGC TAAAGCTGAT GCGTGAGCAG AAATATAATT TCCCAGCTAC CGTCGAACTG
GAATATAAGA TTCCAGAAGG GTCTAATTCT GTAGCTGAAG TGAAAAAGTG CGTAAACTTT
TGTCGGAATG CCTTGAGTTA G
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| Protein sequence | MNNHASRRKF LGTTAALLAG TAAGTHKLFG APALIRSLGD KPNSLIDGVQ IGVITYSFRE
MPDQSAEATL QYVLDSGVSA IELMGGPAES FAGAPKSTVD MRLVFPLMRK KRENQPLTED
EQKMVTEAET QMKAYRAEMT KWRLSVPMSK FEQVRKMYNQ AGVRIYGFKP DTFGMQSSDA
EIEYGLRAAK TLGANQVTLE HPANDAHTLK LGTMAQKQGM KVGYHGHEQQ TPTFWDTALA
QSPANAMNFD LGHYVAAGNP DPLVLIKQKH DRIASMHIKD RQTADHGKGN LVWGQGDTPL
LQVLKLMREQ KYNFPATVEL EYKIPEGSNS VAEVKKCVNF CRNALS
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