10 homologs were found in PanDaTox collection
for query gene Ssed_2549 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_2549  amino acid ABC transporter  100 
 
 		 259 aa  535  1e-151  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_2080  amino acid ABC transporter  48.24 
 
 		 261 aa  252  4.0000000000000004e-66  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013457  VEA_000985  ABC-type amino acid transport/signal transduction system  33.47 
 
 		 251 aa  149  5e-35  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_07039  hypothetical protein  34.15 
 
 		 251 aa  148  8e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_2232  hypothetical protein  29.73 
 
 		 243 aa  117  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  0.91334  n/a   
 
 
-
 
NC_008228  Patl_0586  amino acid ABC transporter periplasmic protein  21.71 
 
 		 287 aa  50.4  0.00003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0973  amino-acid-binding periplasmic (PBP) ABC transporter protein  32.04 
 
 		 303 aa  49.7  0.00005  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00938185  normal  0.751269 
 
 
-
 
NC_012856  Rpic12D_3315  extracellular solute-binding protein family 3  32.32 
 
 		 298 aa  44.7  0.001  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_3522  amino acid ABC transporter periplasmic protein  25.33 
 
 		 276 aa  43.1  0.004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.389292 
 
 
-
 
NC_008740  Maqu_1047  extracellular solute-binding protein  25.14 
 
 		 256 aa  42.7  0.006  Marinobacter aquaeolei VT8  Bacteria  normal  0.519655  n/a   
 
 
-
 
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