| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0586 |
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| Symbol | |
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| ID | 4173242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 671295 |
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| End bp | 672158 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053588 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_660169 |
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| Protein GI | 109896914 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGCTC CGACTCCTAC ATATTATTAC ACTAATAACA TAATGATTTT TCAGCCAACA
AATCGGGGTT TTTTATTATG CACTGGAGCG TATGCCGTGT TTCGTAATTT AACCTTAATC
CTTTCCCTAT GTTGCTTATT CCATCAAAAG GTCAGTGCCC AATCTAATCA CGAAGAGTTA
GCTTTAGCGG TTATTTATGC TGAAGGGCCG CCGTTTTACG TCTTTGATGA AAACACCCAG
CGTTCAAGCG GCTTATTTAT AGATATACTG CAACACTTAG CTCAGTCACT TGATCGTGAT
TTACGTTATT TACCCACCGC ACGAAATAAA ATAGAGCAGG ACGTTTTGGA ACAGAAAGCG
GATGTGGCCT TTTTAGCGCC TAAGTGGTTA GATTCGCCCG AAAAACTGCT GTTCAGCGAT
CCCGTCTTTA GTTATCAACA CGCCTTTTAT GGGCTCAACG CGCCACAAGA GGATGATAAA
CTTGCAGATA CCGTGCATGG CAAAAGTGTC TGCTTGCGTG AAAATTACCG CTACCCAGAG
TTGGATCCTT GGCTTAAAAA TGGGATGTTG TCTCCCGTAT ATGTGTCTAG TCATTCTCGC
TTATTTGACA TGCTACAACT CGCGCGCTGC GACCTGATAT ACACCAATAC ATATAGAGCA
CGTTGGACGC TGAACGCAAA TCACTATGAT AAGGCCGTGT TCCAGTTGGG CACGATGGGG
TTAACCGATG AGATAATGTT GGCTTTTTCA CCTCGTTGGA CAGACAAGAT CCCGCAAGTT
AATGCCATCA TTGAGCAAAT GCGTCAATCC GGTGAAATAC AAGACGTTAT AGATAAGAAC
TTGAATCAAC AGCGTGCTGA ATAA
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| Protein sequence | MIAPTPTYYY TNNIMIFQPT NRGFLLCTGA YAVFRNLTLI LSLCCLFHQK VSAQSNHEEL
ALAVIYAEGP PFYVFDENTQ RSSGLFIDIL QHLAQSLDRD LRYLPTARNK IEQDVLEQKA
DVAFLAPKWL DSPEKLLFSD PVFSYQHAFY GLNAPQEDDK LADTVHGKSV CLRENYRYPE
LDPWLKNGML SPVYVSSHSR LFDMLQLARC DLIYTNTYRA RWTLNANHYD KAVFQLGTMG
LTDEIMLAFS PRWTDKIPQV NAIIEQMRQS GEIQDVIDKN LNQQRAE
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