| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3522 |
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| Symbol | |
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| ID | 5105990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3881324 |
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| End bp | 3882154 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504774 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001189002 |
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| Protein GI | 146308537 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.389292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCT TGCGACTAAG ATTGCGCCTG TCATCTAGAG CGTCGAGTTG GCTGGGGTGG
TCTGGGATCT GTAGTCGAGC GGGAGGGCGT GTGCTCAGAG TCTTGTGCCG GGCGATCATC
GCCGGTCTGC TGATTTCTCC TGCGGCCTTG GCGGGCACGC TCACCTATGC CGTTACCGAT
GAAAGCTGGG AGCCGTACTG GATAGTGCGC GACGGCCAGG TCAGCGGCAT CCTGCATGAC
TTCATGCTCG CCCTCGACGA GCGCCTGCCG GAGGAGTTGC AGGCGAGCCA TCCGCTGCCG
CCGCTGCGTA CCCAGAAACT GTTTCGCGAA GGGCAATTGG AGCTCGAGTG TTGCGTGAGC
CAGAGCTGGC GTGCCGAGCC CGAGCAGGCG GATGTATCGG TGTGGTCTGT GCCGGTGCTC
GACGCCGATG AGATGCTGCT GTTCGCCCCT GGTGCGGCCT TCCCCTACCG GCAGGTCGAG
GACCTGCGCG GGCGCTCGAT TGCCACGGTG CGTGGCTATG GCTATTTCGG CAGCGAGTAC
TTCCAGCGCA ACGATGGCGC CGATGCGTTC GCACTGATCT ACCGCGTCGC CCAGCGGCAC
AGCGAGGCCG GCATCATCGA CCGCCTGGAG TGGCGTTACC TGACGCACAG CAATGCCCAG
CTGCGATCAC CTCGCTGGCA GGTCGAGGAG GGGCCGGTAA TCCATCGTGT CCAACTGCGA
ATCCGCCTGC ATCGTGCTCA TGCCGATCGG CTGCAGGCGT TGAATGCGGC TATCAGGGAA
ATCCAGGCGG ACGGCACCCT GACGCGAATC GTCGCGCGCT ACGCGCCGTA G
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| Protein sequence | MAALRLRLRL SSRASSWLGW SGICSRAGGR VLRVLCRAII AGLLISPAAL AGTLTYAVTD
ESWEPYWIVR DGQVSGILHD FMLALDERLP EELQASHPLP PLRTQKLFRE GQLELECCVS
QSWRAEPEQA DVSVWSVPVL DADEMLLFAP GAAFPYRQVE DLRGRSIATV RGYGYFGSEY
FQRNDGADAF ALIYRVAQRH SEAGIIDRLE WRYLTHSNAQ LRSPRWQVEE GPVIHRVQLR
IRLHRAHADR LQALNAAIRE IQADGTLTRI VARYAP
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