8 homologs were found in PanDaTox collection
for query gene Ssed_0527 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_0527  hypothetical protein  100 
 
 
619 aa  1292    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3995  hypothetical protein  24.92 
 
 
654 aa  133  1.0000000000000001e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.874955 
 
 
-
 
NC_009831  Ssed_2143  hypothetical protein  27.42 
 
 
632 aa  127  8.000000000000001e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  0.153836  normal  0.0311155 
 
 
-
 
NC_009831  Ssed_2140  hypothetical protein  24.78 
 
 
624 aa  122  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0440524 
 
 
-
 
NC_009831  Ssed_0754  hypothetical protein  25.64 
 
 
630 aa  117  7.999999999999999e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  0.18794  hitchhiker  0.0000158287 
 
 
-
 
NC_009831  Ssed_2145  hypothetical protein  30.43 
 
 
651 aa  117  8.999999999999998e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  0.540332  normal  0.0155271 
 
 
-
 
NC_009831  Ssed_1970  hypothetical protein  22.22 
 
 
653 aa  76.6  0.000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0341  hypothetical protein  38.98 
 
 
61 aa  44.3  0.006  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.87411 
 
 
-
 
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