| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0527 |
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| Symbol | |
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| ID | 5613983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 642520 |
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| End bp | 644379 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931372 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472267 |
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| Protein GI | 157373667 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC GCAATTCCAT TATAGCGGTG TTAGCCCTTA GTTTTGCCCT CGGTGGCTGT
GGCAGCGATG ACTCCCCCAC CCCGGAGCCA CCGATCCCGC CGGAGCCGCC GATTGTAAAG
CCAGATTATG TTTTTGGTGG CCCTACTGAA GATGAGCAAA AGCTAAACAA GGTGATTCAG
TTTGCTATTG TAAAAGGATT CAGCCCACTC GATGATTCTG ACGAAGCCAA GAAGAGCAAG
GCCAAGAGTT ACTCCAGTGG TCATGAGATA GAAGGTGTGC TCGAGTCTAA AATGGTTGCA
GATGCGGCAA AATTGGGACT CAAGGTTGAT TACCTGCTGC CACCCACGGC CATCAACATG
TCAGGTGTAA AGATCGACTC TATCCGCCCA GATATCTTTC AGGATGGCCG TGGTTCTGTG
ATGGATCTGC TACTTTGGGC TGCCAAGAAA TATAACCTCG ACATCGAATA TGAAAAAGAT
GAAAACCTCA AGACTCACTT TATCACCTCG ATCGAAGGCA TAACCGGCCT GCCGGAAGTG
GTAGATCAAG ATAATCTGGG TAAAACCGAG GGCCAAGGCT GGAAGTACCT TGTAGGACCT
AGTATTTGGG AGCATAAGAA AGAGGGTAGC TACGAAACTG AAAGTTACTA CTACAAGGAG
GAGGAGATCT ATTTCCGTAT GGATCACCAC CCACTTAAGA ACGAGATGAG TATCGTTCTG
GTTGCCGCAC AGCCTGGTGA GATGGATATT CGTAAGAAGA AATACCAGAA AGAGATGGAC
CGTTTAGCCG AGAATGGTGG CAAGGTGATC ATCCCCGAGA TCGTCATCGA CTTTAAACCA
GCTAAAACCA CGGAAACAGG CGAAATCCTT ATTCCGAATC AACGCGCGGT ATTTAAAGAT
ATCGAGGTCA CTCCCCATAA CCTCAGATCC GACATCTATA AAGAGGGAAC CATAACCGAG
CTTGATGCCT GGCTATCTCT GGTCGAACAG CGTCCCGATC TGAAGATCGA TTGGTCCTAC
TGGCCACGTT TGAGTACCAA TTCAAATGTT CAGGGCTATG TTGCGACGGC GATCAGCTTT
AACGGCCGCG ATGATGTGGG CAATATTGTT AACGAACGAT ATACTAACAA CGGCTCTTGC
GGATTCGTTC ACCACACGGG TGAGTGGGAA AACTACATGG ACTCAGGAGC CCAAAATGGT
CTCTATCAAT GGGTAATGTG TTCGGCCAGA ACAGATATGG GCGGCGATGA ATATCGTAAA
GCCTGTTATG GCCAGATCCC CGGGATCCTT GGCTATCGTG CCCGCAACTA TGGTGAAGGT
GAGCAATTTG AGAACCATAA CCCTAAGGGG CGTGGTTATA TGAAGTTTGG TTTGCCTTTC
GGTGGTAACG ACCCTCACCT GACGGGTGAT GCCATGATCA TCTATGGCCC TGAATACATC
AACTATATTG GTGCAGCATT CGGAAATGGT TATGGTAACC AAGAGTCGAC TTCAGGTTGT
GATGCCGAAG CTCCTGAGAT CGATCCGACT CGCATCAAAG ATATCAGCCA AGCCAGAGCC
CCGTTAACAC CGTCTCACTT TGGTTGGAAA ATACCGGATT GTACCACCTG TCACAATGCC
GCCAACAGCC ATGTGGTTCA AGATATGGCG CCATGGGAAT GTGCTGAATG TCATGGAAAT
AATGGTGCAC CTGACAGTCA TGGTGAGTTA CTGACCTGTG GTTTCTGTCA TGCCAAGACA
TTAGCCAAAC ACGGCGATGC TTACTCAACC AAAGATGATT ACTACAGTGA GCAAACCAAC
TTTAAAGAGC CTGAAAGCTG CTTGACTTGT CATGTAGAAA AACAGGAAGG CACTCAGTAA
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| Protein sequence | MMKRNSIIAV LALSFALGGC GSDDSPTPEP PIPPEPPIVK PDYVFGGPTE DEQKLNKVIQ
FAIVKGFSPL DDSDEAKKSK AKSYSSGHEI EGVLESKMVA DAAKLGLKVD YLLPPTAINM
SGVKIDSIRP DIFQDGRGSV MDLLLWAAKK YNLDIEYEKD ENLKTHFITS IEGITGLPEV
VDQDNLGKTE GQGWKYLVGP SIWEHKKEGS YETESYYYKE EEIYFRMDHH PLKNEMSIVL
VAAQPGEMDI RKKKYQKEMD RLAENGGKVI IPEIVIDFKP AKTTETGEIL IPNQRAVFKD
IEVTPHNLRS DIYKEGTITE LDAWLSLVEQ RPDLKIDWSY WPRLSTNSNV QGYVATAISF
NGRDDVGNIV NERYTNNGSC GFVHHTGEWE NYMDSGAQNG LYQWVMCSAR TDMGGDEYRK
ACYGQIPGIL GYRARNYGEG EQFENHNPKG RGYMKFGLPF GGNDPHLTGD AMIIYGPEYI
NYIGAAFGNG YGNQESTSGC DAEAPEIDPT RIKDISQARA PLTPSHFGWK IPDCTTCHNA
ANSHVVQDMA PWECAECHGN NGAPDSHGEL LTCGFCHAKT LAKHGDAYST KDDYYSEQTN
FKEPESCLTC HVEKQEGTQ
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