| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2143 |
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| Symbol | |
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| ID | 5610553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2592192 |
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| End bp | 2594090 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640933047 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473880 |
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| Protein GI | 157375280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.153836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0311155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATGA AAAAAATACT TAGCAGTGCG CTACTACTCG GCCTGTTAAC TGGTTGTGGT
AGTGATGACA CCACTGAAAC ACCCGTTATT CCTGAGCCTA AAAAGCCCAA ATACCTCACC
CTGGACATTA AACCCGAAGC AAAGTTCGAA GGCAGCTTCA ATGTTTATCT GGGCCGTTTC
CCCGACCCTC TTAAAGATTG GCTGCAGAGT GAAGATGCAC GCGATCTCAA TGATGATGGC
CATATCGATG AGAGAGATGC ACATAAAGAC GGTGTCTATA ACCCTAAGGC TACACCAATT
GTCATCGATG CCACCAAGAT GCATCAACTG CTCAGCACAA ATCCCGATGG GTTGGGAGCC
GGTAGTGCTC GAGGTGATAT TTTTGTTGAT GGTCATTACT CTGTATTTGA TGCACTTCGT
TATCTGGCCG TTACCCGTAA TGACCTGAAG CTCGAATCCA TCATCTCACC ACAAAACAGC
GGCCGGGATA CCTATGAGTT CACCCTATCC TGGGATAGCA ACGCAGATGG AGTATTCGAC
GAACAAGATA ATGACCTTAA GGATAATCTG GTCATTTATG ATAACTATAT GGGCACTGAC
TGGCATTTTC GGTTCACCTT CGATGGTGGT GACCTGACTA CGCTTAATGG CACACTCGAT
GGCCTGGGGC CTCAGGGTGA AGTGACCTAT GGCCGCATGG ATCAGTTTTG GATCCAACCG
GGAATGAATA TACGTTTCCA GCCGTTTTCA CCTGAGATGA CCCAGCGCCG ACATTGGGTT
CAGGACAGAG AGATGACCCG CCTGGCTGAA AATGGTGGCA AGGTGGTACT CCCACTACTG
CGTTTAGTGC CCTCTATGAA GCGGGCACCG ACGGATCTGA TAAACCTCGA AGTTACGCCT
CACAATATGA GACCGGATAT TTTTCAAAGC GGCGTGATAA CCAAGATGGA TATCTTCCTC
TCGGCAGCGG ACGCGGATAC AGACATAGCA TTCAACTACT GGCCCTCTCT CTCTACAGGC
GCCGAAGTAG GACATTTTGC ACTATTCAGA GCGCTGGAAG TCGCATCGGA AGTGGGTCGT
GGTTGGACAA CTGCATATGG TGATATGGCG GTTCAGGGTG ACTTTAATGC TCACTCAAAA
TGTGACTTTT CATCACCCGC CGGTGGCGGG CAAGATATCC TGGTTGACCC GGAGCACTGT
CGCCTGGACT GGAACTCAAA TTTTGGCGGC AATGCACTGC ATATCATGCC GGATGTCGGG
GTAATGAACC AACCGGTTGG CTTTGCCATG GCTGCGATTA AGTCACACTA TGAATTATTT
GGCATGACTG AGTATTCAGG TAAAGAGGTT ACCGAACGTG ATTTCAGTCC ACAGGAGGAT
GGCAGCGATG TGATGACGCT TCAGGTATTC CCGCTGCCGA AAGATAACCA AGGGTCGATG
CTGAAAGAGA GCCATTTTGG TTGGGGAATT GCCGATTGCA CCGAGTGTCA TAACGAAAGT
AAAGATCCTA GTGGACATGG CGGATATAGC TGGCCGATAA ACAGTAGTGA CGGTTTCGAT
GTCACTCAGC CTTACTATTG CGCGACCTGT CATGGCAATA ACGGCGCACC ATCGGCCCAT
GGAGAAACCG CTCGCTGTTT CTGGTGTCAC GCCGGAGAGT CCAAACCGGC TCACCATGGA
GAGGCGTCGA CGCAAAAACT CTATCAGGGC GATGCGATTA AGAGTAATGA TCACATCTAC
AACGATCCCA ATGAACTTAA TGCCCTACCC AGAGACAAAG ACGGTAACTA TAAGGCCTAT
GAGAAGGTCT GGAGCTCGGT TAATTCTGAC TGGGACATGA GCCGGGTGTT CCCTGACCCA
TACTCCTGTA TGACTTGTCA TAAGAATTCG GCTGAATAA
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| Protein sequence | MIMKKILSSA LLLGLLTGCG SDDTTETPVI PEPKKPKYLT LDIKPEAKFE GSFNVYLGRF
PDPLKDWLQS EDARDLNDDG HIDERDAHKD GVYNPKATPI VIDATKMHQL LSTNPDGLGA
GSARGDIFVD GHYSVFDALR YLAVTRNDLK LESIISPQNS GRDTYEFTLS WDSNADGVFD
EQDNDLKDNL VIYDNYMGTD WHFRFTFDGG DLTTLNGTLD GLGPQGEVTY GRMDQFWIQP
GMNIRFQPFS PEMTQRRHWV QDREMTRLAE NGGKVVLPLL RLVPSMKRAP TDLINLEVTP
HNMRPDIFQS GVITKMDIFL SAADADTDIA FNYWPSLSTG AEVGHFALFR ALEVASEVGR
GWTTAYGDMA VQGDFNAHSK CDFSSPAGGG QDILVDPEHC RLDWNSNFGG NALHIMPDVG
VMNQPVGFAM AAIKSHYELF GMTEYSGKEV TERDFSPQED GSDVMTLQVF PLPKDNQGSM
LKESHFGWGI ADCTECHNES KDPSGHGGYS WPINSSDGFD VTQPYYCATC HGNNGAPSAH
GETARCFWCH AGESKPAHHG EASTQKLYQG DAIKSNDHIY NDPNELNALP RDKDGNYKAY
EKVWSSVNSD WDMSRVFPDP YSCMTCHKNS AE
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