8 homologs were found in PanDaTox collection
for query gene Ssed_0341 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_0341  hypothetical protein  100 
 
 
61 aa  125  2.0000000000000002e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.87411 
 
 
-
 
NC_009831  Ssed_0754  hypothetical protein  66.1 
 
 
630 aa  82.4  0.000000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.18794  hitchhiker  0.0000158287 
 
 
-
 
NC_009831  Ssed_2145  hypothetical protein  48.98 
 
 
651 aa  58.2  0.00000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.540332  normal  0.0155271 
 
 
-
 
NC_009831  Ssed_2143  hypothetical protein  48.08 
 
 
632 aa  57.4  0.00000006  Shewanella sediminis HAW-EB3  Bacteria  normal  0.153836  normal  0.0311155 
 
 
-
 
NC_009831  Ssed_2140  hypothetical protein  44.93 
 
 
624 aa  56.6  0.0000001  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0440524 
 
 
-
 
NC_009831  Ssed_3995  hypothetical protein  44.23 
 
 
654 aa  48.1  0.00004  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.874955 
 
 
-
 
NC_009831  Ssed_0527  hypothetical protein  38.98 
 
 
619 aa  44.7  0.0004  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1970  hypothetical protein  40 
 
 
653 aa  43.5  0.001  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
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