7 homologs were found in PanDaTox collection
for query gene Ssed_1970 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1970  hypothetical protein  100 
 
 
653 aa  1368    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2143  hypothetical protein  37.62 
 
 
632 aa  369  1e-100  Shewanella sediminis HAW-EB3  Bacteria  normal  0.153836  normal  0.0311155 
 
 
-
 
NC_009831  Ssed_2145  hypothetical protein  36.01 
 
 
651 aa  365  1e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  0.540332  normal  0.0155271 
 
 
-
 
NC_009831  Ssed_2140  hypothetical protein  35.46 
 
 
624 aa  359  9.999999999999999e-98  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0440524 
 
 
-
 
NC_009831  Ssed_0754  hypothetical protein  35.22 
 
 
630 aa  358  1.9999999999999998e-97  Shewanella sediminis HAW-EB3  Bacteria  normal  0.18794  hitchhiker  0.0000158287 
 
 
-
 
NC_009831  Ssed_3995  hypothetical protein  29.64 
 
 
654 aa  220  7e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.874955 
 
 
-
 
NC_009831  Ssed_0527  hypothetical protein  26.53 
 
 
619 aa  76.3  0.000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
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