| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0754 |
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| Symbol | |
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| ID | 5611053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 898493 |
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| End bp | 900385 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931598 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472493 |
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| Protein GI | 157373893 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.18794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000158287 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATACA ATCAGATCTT TTTGTTACTA CTAACCTCCT CTCTGCTCGT TGCCTGCGGT
GATAGCAACA GCCCAGCGCC GGAGCCTACT CAACCGCCTC AATCCCAATA TGATTACCTA
GATGTAAAAA TGAAGCCGAC GGCACCCAAG TCAGGAACTG TTACAGTTAT GTTGGGGGAG
TTTGATAACA AGATAACCCA GTGGATACTG GACAACCCAA CTGCAGACCT CAACAAGGAT
GGTGGTGTGG GATTGTTGGA TGCCCACCTT GCCGGAGTCT ATAACGATGA TAAAGAGAGC
ATTGAAGTGG ATCTCTCTGA TATGGCCGAC TTCCTTGCCA CTAATCCGGA TGGCTTGGGT
GCCGGTACGG CGAGGCCTGA TATATTTAAA CCTGGCCACT TCTCCGCGTT TGATCTGCTT
CGGTATCTTT CGGGGGGCCG GGACGATCTT GAACTGAGTG GGATAACCAA TTACGATACC
ACCGGCCTGG GCACTTACAC CTTCAACGTC TCCTTCGATG CGGATCAGTC CGGCATCTTT
GACCCCGGAA CAGAGGAGAC GAATAATGGC AACTGGCACT TCCGCTTCAA CGCCCATGGC
GGCGATTTCA ATCGTGCCCG GGGAAATATG CAGGGTTTTT CTCCTTCTGG TGAGGCTAAC
TATATCAGGA TGGATGAATA CTGGCTTCAG GATGGCTCCT TGATCACCTT CCAGCCCTTT
TCCGACGAGA TGACGGCACG GCGCCAGTGG ATCCAGCGAC AGGAAGTCCT GAACTTTGAG
GCCAGTGGCA ACCAGCCAAT GGTACCGTCC ATTACGGCCC TAACCTTTGA TGCTAACTGG
AATCCTTCAG TTCAAGCACA AGCCAATGAC GTTAAAATTA CCGCTCACAA CCATAGGGAC
GATATCTTCC AGCCCGGGGT GGTCACTGTT ATGGATGCGA TGATCTCCGC TCAGGAGCAA
TTGAACGGTG TTAGTTTCTC CTACTGGGAT ACCCTGTCAA CAGGTGCCAA AGTAGGGCAC
TGGGCTGTAT CCAGCATCGG CGGTAAGCGT AACTCTGGAC TCTATGGTTG GTTTTCTGAG
TTTCACAATC CGGCAAATAA GCCTGGAGAT CCGGACTTTA GTAAATATCC AAATTGCAAT
TGGGGTATTG ATGGCAGTCA AGACGGCGAA CCTCGTGTTT CCCAAGAGGT ATGCCAGCGA
GATTGGGCTG GTGCCTTTGG TGGCGAGCTT GTGCATATGC TGCCGGATGT TTACCCAATG
AACTACGGGT ATAACAATTT CTCTTATGTA TACGGATCGA TGTACGATAT TTTTGGCCCA
ACAAAACGCG ATATTAATAA TTCCTTGGTA TGGGAGTACA AAGAAGGAGA ACAGCTAGAC
AAGGTTACTT TTCAAACCTT CGAGCTACCT TCGTCGCCGG TAGGTAACGC GTCATTGCTG
GATGAAGCCC ACTTTGGTTG GCAAATTGCC GATTGCACCC TGTGCCATAA TGAGTTAAAG
GAGCCTCTTG GGCACGGAGG TCACAGCTGG CCGATCAATA GCCGGGACGG CTTCAGCCAG
TCGCAGCCTT ACTACTGTGC TAGTTGTCAC GGTGCCAACG GTGCACCTAA GGCCCACGGC
GAGGATGATC GCTGCTTCTT CTGCCACGCA GGAGAGAAGC TACCGAAAAA ACACGGCGAT
GCCTCCACTA AGGTGCTATA CAAAGGGGCT GATAAGATGA TGGGCAACAA GATGTATGGG
TTCAACCCCA AGTATCGGGG AGTTCCAGCG GATGAGTTTG GTAACCATAA ACCCATTGAA
CAGCGCTGGA ATTCCAGAAA TAATGACTGG GACATAAGCC GTGTATTCCC TGACCCTTAT
GCCTGCATGA CTTGCCATCA GCAACCGGAG TAG
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| Protein sequence | MKYNQIFLLL LTSSLLVACG DSNSPAPEPT QPPQSQYDYL DVKMKPTAPK SGTVTVMLGE
FDNKITQWIL DNPTADLNKD GGVGLLDAHL AGVYNDDKES IEVDLSDMAD FLATNPDGLG
AGTARPDIFK PGHFSAFDLL RYLSGGRDDL ELSGITNYDT TGLGTYTFNV SFDADQSGIF
DPGTEETNNG NWHFRFNAHG GDFNRARGNM QGFSPSGEAN YIRMDEYWLQ DGSLITFQPF
SDEMTARRQW IQRQEVLNFE ASGNQPMVPS ITALTFDANW NPSVQAQAND VKITAHNHRD
DIFQPGVVTV MDAMISAQEQ LNGVSFSYWD TLSTGAKVGH WAVSSIGGKR NSGLYGWFSE
FHNPANKPGD PDFSKYPNCN WGIDGSQDGE PRVSQEVCQR DWAGAFGGEL VHMLPDVYPM
NYGYNNFSYV YGSMYDIFGP TKRDINNSLV WEYKEGEQLD KVTFQTFELP SSPVGNASLL
DEAHFGWQIA DCTLCHNELK EPLGHGGHSW PINSRDGFSQ SQPYYCASCH GANGAPKAHG
EDDRCFFCHA GEKLPKKHGD ASTKVLYKGA DKMMGNKMYG FNPKYRGVPA DEFGNHKPIE
QRWNSRNNDW DISRVFPDPY ACMTCHQQPE
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