| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1970 |
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| Symbol | |
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| ID | 5612248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2379921 |
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| End bp | 2381882 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932854 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473707 |
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| Protein GI | 157375107 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATA AAAAACTAAC CGCATTAATA CTCCCTCTAA TATGGGGGAT AACAGCGTGT
GGTTCTGATG ATAATGACAA CGATGCTGTT CAACTCCCCC CCCCAGATGA GCAAGTAGAG
CGCAACGTAG CTTGGGATTA TATTGAGACG CCCTACAATC CATTCGATAG CAACGAGTTG
AGCGGACGGG TCTTTGTTGA GCTGGATGGA ATTGATGATC GGGTTACTAA GTGGATTGCT
AAGAACAGCG CTAATCTGGC ATTCGATCTC AATGCCGACG GTGCAATCAA CCAATATGAC
GTGCCGGAAG ATGTTTTTCT CACACGAAAG AATGGCGGGC CGATGCTGCC TAAGCTTGAG
ATCGATACCG AAGATATGAA GCAGGTGCTC TCAAGCAACC CTGATGGGTT AGGGGCCGGA
ACCTCGCGGC CAGACGTTTT TGTGGAAGGA AACTACTCTG TATTCGATCT GTTGCGCTAT
CTGGTTGTGA CTCGACCTGA TATGCAGTTT GACAGCATAA CCCCCTACCA GGAATCAGCA
TTAGATACCT ATGAGTACCT TTTTTCCTGG GATGAGAATG GTGATGGTGA CTTCAGCAAT
GATGGCGAGT ACAGCGCGAG CCAGAACTGG TCTTTCACCA TCCTGAACAG TAATGGTGAT
CTGGGATATA TCAGCCCCGG TATGTTTACC TACAAACGCA TGGACCATTC CTGGTTGCGT
CCGAAGCAGG TGGTCCGTTT CCAGAACCAC TCGGATACCA TGACCAGCCG CACCCGTTGG
ATATGGGAGC AACAGCAGCA ACGGCTGGCC GCCAATGATG GCAAATTTAT CATTCCACAA
ATCCAGTATC TGGATGTCAG TCAACGCCCA CCGGCCATGA ACATCCTGGC TACAAACCTT
GAGGTTAAGC CGTTCAATGT ACGCAAGGAT GTGTTTGTTG AGGGCCAAAT AACCTCCATG
GATGTATGGC TGACGCTGGC GCATGAGCAC GACATGGACT TTCGCTTCAG CTTCTGGGGA
ACGCTATCGG CAGGCGCGAT GGTCAATGGC TTTGCACTTT CCCACGATCC CATTGCCGGT
ACCTATGGTG GATGGACCGC GAGCACCCCA AGACAGGGCG AGTTTGCTTC AGCAAATGAT
TTTGACCAGG TACAGCCACT GTGTGATTTT GGCTTGGATG GCACGCCGGA TGGCGAGGGA
CGCCTGACGC AGGAGCAGTG TACGGATGAG TGGTTAACCC GACTTCCTAT TCAAGGAAAC
AACGTTGCGG AAGTCGCAGG CAATAATCTT CACGCCTACC CACCGGAGTA CATGTTATTG
CTCGGCCCAG CGGTTCTGGC CCCGCTAAAT GGCGTGGTTG AAGTCGATCT GATCAATTTT
CCTGATGCAC GCACCGAAGT GTATGTGACT GATGACATGT TGGAAATGGC TGATGTACCG
GATGCCTATG ACATGCAGGG CAAGGAAACG GCGGTATTAA CGGCTAAATA TGCCGCTACC
GAGCCAGTGG GTAAGGCGCG AATTCTGGAT GAAAACCACT TCGGCTGGAA GATCTCCGAT
TGTACTCTTT GTCACAACGA AGAGAAGCAA CCCTTAGGTC ATGGAGGACA GTCCTGGCCG
ACCAATGCTG TCGAAGGCTT TGATTACCAG CAACCCTACT ATTGTGCCAC CTGCCATGGT
GCCAACGGCG CACCTAAAGG GCACAATCGC GGTGCGCGCT GCTTCTGGTG TCATAGCAAT
CGAGGCGAGT ATGTGCCGCA AAACCATGGT GATGCCAGCG TCAGCCGGCT GCTAAGCGGT
GATGAGGTGA TTTACTCAAA GCGGACTTAT CTGGCTGTGT CAACAGACCG GGAGCAAAAG
CCGATTCCTT TCGAGGAAAT AGAGAGTAAC CATAACAGCG ACTACAACAT GAGTAAAACC
TACCCGGCAC CCTATGCCTG TATGACTTGC CATGGAAAGT AG
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| Protein sequence | MRNKKLTALI LPLIWGITAC GSDDNDNDAV QLPPPDEQVE RNVAWDYIET PYNPFDSNEL
SGRVFVELDG IDDRVTKWIA KNSANLAFDL NADGAINQYD VPEDVFLTRK NGGPMLPKLE
IDTEDMKQVL SSNPDGLGAG TSRPDVFVEG NYSVFDLLRY LVVTRPDMQF DSITPYQESA
LDTYEYLFSW DENGDGDFSN DGEYSASQNW SFTILNSNGD LGYISPGMFT YKRMDHSWLR
PKQVVRFQNH SDTMTSRTRW IWEQQQQRLA ANDGKFIIPQ IQYLDVSQRP PAMNILATNL
EVKPFNVRKD VFVEGQITSM DVWLTLAHEH DMDFRFSFWG TLSAGAMVNG FALSHDPIAG
TYGGWTASTP RQGEFASAND FDQVQPLCDF GLDGTPDGEG RLTQEQCTDE WLTRLPIQGN
NVAEVAGNNL HAYPPEYMLL LGPAVLAPLN GVVEVDLINF PDARTEVYVT DDMLEMADVP
DAYDMQGKET AVLTAKYAAT EPVGKARILD ENHFGWKISD CTLCHNEEKQ PLGHGGQSWP
TNAVEGFDYQ QPYYCATCHG ANGAPKGHNR GARCFWCHSN RGEYVPQNHG DASVSRLLSG
DEVIYSKRTY LAVSTDREQK PIPFEEIESN HNSDYNMSKT YPAPYACMTC HGK
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