| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3995 |
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| Symbol | |
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| ID | 5610207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4891430 |
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| End bp | 4893394 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640934949 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475727 |
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| Protein GI | 157377127 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.874955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA AAAAACTAAT CGCCTTAGCG GTATTATCCG CTATTGGCTT GGCCGGTTGC
GGCTCCGATT CGGACAGCTC TACTCCGCCG TCGACGCCAG AGCAACCTAC TCCGGCTCCC
ATTTATGACA ACCTGGATGT GCATGTAGAG CCAAATAGGC AATTTGACGG CCTGGTTCGG
GTCTATCTGG GGCGCTGGTA TCCCTGCACC GACGATCATC CGGAGATGTG CGCCGATGAA
ATGCCGACGG ATTATGAACT GCCGACTACA GGTAGCCAGA CCGGCACCTA TGGTAAGCCC
AAGGACGTAA ACGATCGTAA TAAAAACAAG TACTACAACG CCAGTACCAG CGACGATGGC
AAGTACTACA TGGAGGTCCA CTCCGATGAC ATAAAAGCCT ACCTTGGTAC TTCCTCTATC
CGTGAAGACA TCTTCGTTCC CGGCCAATAC TCCATCCTGG ACGTGATGCT GTATGTGTCA
TCTATCCGTG GTGATTTGGA AGTCACACTA GGGGAGTTCA ACACCGATCT CAACACCTAC
GACTTCACCG TCTCCTTCGA CGCCAACGGC GACGGTGACT TCGATGACGT CGCCGCAGGG
GACTACCAGG ACAGCGAGAA CTGGTACGCA TCCTATACTT ATGATCAGGG TGACAACCTT
AAAATTGCCA ACCCAATTCT CGATACCCTT TACGAGCGCC TGGATGAATT TTGGGTGCAG
CCGGAGATGA ACATCCGCTT CCAGCCGGTC TCCCAAGCGA TGAGAGATCG TGTTAAGCAG
ATGCAGCGGG CCGAGGCTGA TCGCTTGAAA GCCAACGGTG GCAAGGTGAT CCTGCCGAGT
CTGAGCCTGT CCTATCTTGA CGGCCGGCGT GCCCCTCAAT TCCCGGCCAG TAACTTCGAG
GTCAAGGCCT ACAACCTGCG CCCCGACGTG TACCAGCCTG GGGTGATCAC CTTGATGGAT
GCGTTGATGA CCGCTCACCA TGAGTATGGC GTCGACATTC ACTTTGGCTA CTGGCCCACC
CTCTCCACCG GCGCGACGAT TGACGCCTAC ATCATTACCC AGGTCGAAGG ACTGCGCAAC
GGAAGCGAAG GGTTCAGCGG CTGGGGCTGG GTTGCCGGTG AAGGCCAGTC CGCGGTGGAT
TTCTTCAACG GCCCGGCGTG GCCCAAGGCC GGTGAACTGG TCAATGGCAC CGCTCCCTAC
GATAGCAAGA CCATCTGCCA CTTCCTGCGC GATGAGAGTG GCAAGCTGGA TGAGACCACA
GCCCAGGAGT GCATCGACCA GTGGTATTCG GGATATGGTG GCATTAGCCT CCATCGCACC
GCCGATATCT CGGTGATGGT GAACCCTAAG GAGTTCGTCC AAATGTATTG GATTAGCTCG
GACTATGGAT CCAAGTATGA GATGACCGAG CACAATGCTT TTGATAATGG TCTGTACCCT
ATATACGATA TTGCCGAGGC GGCAGCCCCT CTTGAAAGCA CTCACTTTGG TTGGGGGGTT
GCTGACTGTG GCCTATGTCA TGGCTTGACT AATACCCATC TCGAAGGCGG GGACTCGCCG
GTTCTGCCTG ACAGCACCGA GCCTTACTTT TGTGCCTCTT GTCACGGCGG CAACGGTGCT
CCTGCCGGTC ACGGCGCTGT GGCGCGCTGC CACTTCTGTC ACTCCAAGGA CAAGCTGATG
CTCAATCACG GCGATGCTTC AAAGAATTTC CCCTTCGATA AAGTGCAGTG TTTTGGTGTC
ACTCAAAGGG CTAACGAGCT TAACGGTGAA ATGGGCCCCT GCGCCGATGT CGTGAAGTCG
AAGGATCCTA CAACCAAGGA TATGCTGGAC CTCTACCGCC ACAACGGTAC TACTTATGGA
CAACAGGCTG CAAGCAAACA GTTGACCCGT GGCAACAGCG ACTGGCACAC CAGCGAAACC
TTCCCGGACC CCTACTCTTG CATTACTTGT CACGTGAGCA AGTAG
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| Protein sequence | MMMKKLIALA VLSAIGLAGC GSDSDSSTPP STPEQPTPAP IYDNLDVHVE PNRQFDGLVR
VYLGRWYPCT DDHPEMCADE MPTDYELPTT GSQTGTYGKP KDVNDRNKNK YYNASTSDDG
KYYMEVHSDD IKAYLGTSSI REDIFVPGQY SILDVMLYVS SIRGDLEVTL GEFNTDLNTY
DFTVSFDANG DGDFDDVAAG DYQDSENWYA SYTYDQGDNL KIANPILDTL YERLDEFWVQ
PEMNIRFQPV SQAMRDRVKQ MQRAEADRLK ANGGKVILPS LSLSYLDGRR APQFPASNFE
VKAYNLRPDV YQPGVITLMD ALMTAHHEYG VDIHFGYWPT LSTGATIDAY IITQVEGLRN
GSEGFSGWGW VAGEGQSAVD FFNGPAWPKA GELVNGTAPY DSKTICHFLR DESGKLDETT
AQECIDQWYS GYGGISLHRT ADISVMVNPK EFVQMYWISS DYGSKYEMTE HNAFDNGLYP
IYDIAEAAAP LESTHFGWGV ADCGLCHGLT NTHLEGGDSP VLPDSTEPYF CASCHGGNGA
PAGHGAVARC HFCHSKDKLM LNHGDASKNF PFDKVQCFGV TQRANELNGE MGPCADVVKS
KDPTTKDMLD LYRHNGTTYG QQAASKQLTR GNSDWHTSET FPDPYSCITC HVSK
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