| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2145 |
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| Symbol | |
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| ID | 5610534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2595356 |
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| End bp | 2597311 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933049 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473882 |
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| Protein GI | 157375282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.540332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0155271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA GAAAAAAGCT ATATAACGCG CTGTTACTGA GCATGTTAGC TGGATGTGGT
AGTGATGACT CTCCACAGAC TCCTGTAACG CCAGAAGAGC CGAAGCCAGA GAAATCCAAA
TACCTGACGC TGGATATCAA ACCTGATACT AAATTTACCG GTGAATTCTA TGTAAATTTG
GGGCGGTACG AAGATCCGGT GACGCATTGG ATACATGACA ACAGCGACCT GGATAATAAA
GACAAGCCAA AAGCCAACTG GCCAGATGTC GATTTCAATA ATGATGGTTG GATAGATGAA
CGAGACGCGC ACCTGGCTGG TGTGTATAAC CCGAAAGAGG CAACTATAAA AATCGATGCA
ATCAAGATGC ATCAGCTATT AATGACCAAC CCAGACGGTT TAGGCGCTGG CACTGCGCGT
CCCGATATAT TCGTTCACGG TCACTACGGC GTATTTGATG CTCTACGCTA CCTTGCCGTT
ACACGTAATG ATCTTAAAAT CGAAAATATT GTCACTCCGG AAAACAGCGG CCGTGATACC
TTCGAATTTG TAGTGTCCTG GGACAGCAAT GGCGACGGTG TGTTCGATGA TCAAGATAAC
GATATCTATG CCAACTACCA AGGCAAAGAC TGGCATTTCA GGTCAAAGTA CCATGGAGGA
GAGTTTAAAA AAATCGACAG CACCATAAGT GGTATCGGAC CTCAGGGCGA GCTCACCTAC
TCAAGAATGG ATCAATTCTG GATCCAGCCA GGCATGTCTA TCCGCTTCCA ACCCTTTTCT
CCTGAGATGA CTCAGAGACG ACACTGGGTT CAGGACAGAG AGATGGCCCG TGTAGCAGAA
GCCGGAGGCA AGGTTATTGT GCCAACAATG GCAATCGATT ACAAAAAGCC TGATACGCAG
CCAACCGTCA TTAAAAATCT GGAGGTAACA GCTCACAACA TGCGGCCTGA CATCTTCCAG
CCTGGTGTTA TAACTAAGAT GGATGTGTAC CTCTCTGCTG CCGATGCGGG GCAAGATATC
GCGTTCAATT ACTGGCCAAC TCTCTCCACC GGAGCCAGAA TAGAGCACTT TGCCCTGTTC
AGGATCAATG GTGTGGCATC AGATGTGGGG CGTGGCTGGA CAACCGGGTA TGGTGAAATG
GCAATGATCA AAGATTTCAC CCGAAACTCA ACATGTGACT TCTCATCACC GGCTGGTGGA
AACATGGAGA TAGAGGTAGA TCCGGAACAT TGTCGCATAG ATTGGAGAAC TAATTTCGGT
GGCTGGGCCG TGCATATCAT GTCCGATGTA TGGGTAATGA ACCAGCCAGT CGAATATGTC
TATGCGGAAA TAAAGTCTCA TTACAAGGTG TGGGGAATGC CGGAGTATTC AGGTAAAGAT
GTGATGGAAC GTGATTTCAG CCAGGACGAA GATGGCTCGG ATATCATGAC GCTTCAGGTA
TTTGACCTTC CAGATGACAC GAACTCTGAA TCAAACAGAG CCATGTTAAA ACCCACTCAC
TTCGGCTGGG GGATCGCCGA TTGCACCGAA TGTCACAATG AGAGTAAAGA CCCACTGGGC
CATGGTGGCC ACAGTTGGCC GATAAACAGC AGCGATGGTT TCGATGAGAC TCAGCCTTAT
TACTGTGCCA CCTGTCATGG GAGCAATGGT GCACCGCAGG GACATAACGA AACTGCGCGC
TGTTTCTGGT GTCATGACAC GAAAGAAAAC CGACCGCAAC ACCATGGTGA TGCCTCCACT
CAACGTCGCT ATCAGGACAG CAAAGGGGAA ATAAAGAGCA ACACCCACAT ATACAATACC
AATATCCCTA AGGATTTAAA CTCTTTACCT AGGGATAGCA TGGGTAACTA TGAGGAGTAC
ACGGACCTGA TGAGCTCGGT AAACTCTGAC TGGGATATGA GCCGGGTATT CCCCGATCCT
TACTCCTGTA TGACTTGCCA TCCAAACCAA AATTAA
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| Protein sequence | MMMRKKLYNA LLLSMLAGCG SDDSPQTPVT PEEPKPEKSK YLTLDIKPDT KFTGEFYVNL
GRYEDPVTHW IHDNSDLDNK DKPKANWPDV DFNNDGWIDE RDAHLAGVYN PKEATIKIDA
IKMHQLLMTN PDGLGAGTAR PDIFVHGHYG VFDALRYLAV TRNDLKIENI VTPENSGRDT
FEFVVSWDSN GDGVFDDQDN DIYANYQGKD WHFRSKYHGG EFKKIDSTIS GIGPQGELTY
SRMDQFWIQP GMSIRFQPFS PEMTQRRHWV QDREMARVAE AGGKVIVPTM AIDYKKPDTQ
PTVIKNLEVT AHNMRPDIFQ PGVITKMDVY LSAADAGQDI AFNYWPTLST GARIEHFALF
RINGVASDVG RGWTTGYGEM AMIKDFTRNS TCDFSSPAGG NMEIEVDPEH CRIDWRTNFG
GWAVHIMSDV WVMNQPVEYV YAEIKSHYKV WGMPEYSGKD VMERDFSQDE DGSDIMTLQV
FDLPDDTNSE SNRAMLKPTH FGWGIADCTE CHNESKDPLG HGGHSWPINS SDGFDETQPY
YCATCHGSNG APQGHNETAR CFWCHDTKEN RPQHHGDAST QRRYQDSKGE IKSNTHIYNT
NIPKDLNSLP RDSMGNYEEY TDLMSSVNSD WDMSRVFPDP YSCMTCHPNQ N
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