14 homologs were found in PanDaTox collection
for query gene Sfri_3060 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_3060  hypothetical protein  100 
 
 		 332 aa  684    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_0559  hypothetical protein  81.33 
 
 		 332 aa  563  1.0000000000000001e-159  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0091  hypothetical protein  30.29 
 
 		 199 aa  103  3e-21  Methanococcus maripaludis C7  Archaea  normal  0.164093  hitchhiker  0.000324527 
 
 
-
 
NC_009975  MmarC6_1810  hypothetical protein  32.12 
 
 		 199 aa  103  4e-21  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0069  hypothetical protein  37.95 
 
 		 367 aa  103  5e-21  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009135  MmarC5_1106  hypothetical protein  30.3 
 
 		 199 aa  99.4  8e-20  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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NC_009654  Mmwyl1_3661  alpha/beta fold family hydrolase  34.48 
 
 		 203 aa  98.6  1e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.610652  normal  1 
 
 
-
 
NC_009634  Mevan_1613  hypothetical protein  37.1 
 
 		 203 aa  84.3  0.000000000000003  Methanococcus vannielii SB  Archaea  normal  0.0837629  n/a   
 
 
-
 
NC_009831  Ssed_3647  alpha/beta fold family hydrolase  32.26 
 
 		 680 aa  84.3  0.000000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.42321 
 
 
-
 
NC_008048  Sala_0008  hydrolase, alpha/beta fold family protein  31.65 
 
 		 258 aa  81.6  0.00000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.0509198 
 
 
-
 
NC_003910  CPS_0147  alpha/beta fold family hydrolase  30.32 
 
 		 668 aa  79.3  0.00000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.557879  n/a   
 
 
-
 
NC_007794  Saro_0277  hypothetical protein  30.4 
 
 		 234 aa  55.5  0.000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4410  hypothetical protein  22.16 
 
 		 170 aa  52.4  0.00001  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.295944 
 
 
-
 
NC_007802  Jann_3411  periplasmic protein-like  28.12 
 
 		 258 aa  47.4  0.0004  Jannaschia sp. CCS1  Bacteria  normal  0.456273  normal  0.679918 
 
 
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