| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3411 |
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| Symbol | |
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| ID | 3935885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3460061 |
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| End bp | 3460837 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905785 |
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| Product | periplasmic protein-like |
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| Protein accession | YP_511353 |
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| Protein GI | 89055902 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.456273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.679918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA CGGCACCGCG CGGGCTGACG GTCAAACGCG CGATCACGGC GATCCTCGCG
TTCCAGATCG CCATGGCGGT GGTCCTTGCG GGTTCTGACC TTATCAGCGC CCTGCCCCGG
CTTTTGTCAG GCGTCAACGC GCCGCAGCTG GATGCGCCCG TAGCGCCCGG CGATCAGGTC
CGCCGCTACC GCCCCGGCGA CCTGCCCGCC CGTGCGCCGC GCGACACGGA CCGCCAATCG
CCCATCCCCG ATCCCGGCGA CATGCCATCG CGCCTGCGCT TCTCGGTGGA TGGTGACGTG
GCGCTGGTCA CCGGCCAGAT CGCGCCCGGC GATGCGGTGC GGTTCGCCGA ATGGCTTGAG
GATGCGGAGA CGTTTGACAG CATCCGCCTC CACTCCCCCG GCGGGTCCGT TATGGATGCG
CTGGCAATTG GTCGGTCGAT CCGCGAGGCC GAATTGTCGA CCTTGATGGA GGCGGGCGAC
ATCTGCCTGT CGGCCTGCCC CTACGTTCTT GTGGGCGGCA CGACCCGCAA TGTGTCCGAC
GATGCCATGG TTGGCGTGCA CCAGCATTAC TTCGGCGAAA ACACCGCCCT TCCGGCCTTT
CTGGCGATTG AAGACATCCA GTTTGGTCAG GGTCAGGTCA TGGCCCATCT TGATGCCATG
GGAATCGACG TCCGCCTGAT GCAACACGCG CTGATCACCC CGCCCGAGGC GATTTACGTG
CTGCTGCCCG ATGAGCTTGC GGAGTATGGC GTGACCATGG CGGAGGACGA CGCCTAG
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| Protein sequence | MTETAPRGLT VKRAITAILA FQIAMAVVLA GSDLISALPR LLSGVNAPQL DAPVAPGDQV
RRYRPGDLPA RAPRDTDRQS PIPDPGDMPS RLRFSVDGDV ALVTGQIAPG DAVRFAEWLE
DAETFDSIRL HSPGGSVMDA LAIGRSIREA ELSTLMEAGD ICLSACPYVL VGGTTRNVSD
DAMVGVHQHY FGENTALPAF LAIEDIQFGQ GQVMAHLDAM GIDVRLMQHA LITPPEAIYV
LLPDELAEYG VTMAEDDA
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