Gene CPS_0147 details

Gene Information

• Locus tag: CPS_0147
• ID: 3520990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 155197
• End bp: 157203
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637282614
• Product: alpha/beta fold family hydrolase
• Protein accession: YP_266915
• Protein GI: 71280524
• COG category: [S] Function unknown
• COG ID: [COG3904] Predicted periplasmic protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.557879
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACCAA CCAATAGAAC ACTTATTGCC TCTGCAATAA TAGCGACAAG TCTATTAGCT 
GCATGTGGCG ACTCTAGCTC AAAGAGTAAT GTAACAACAG ATAAAGCTGT TACCACGCCA 
GTTAACTCAT TCAAGACTGT AGCATGTAAG AGTATGCTGC CTTCCGCTAA AGTAGCCCTT 
TTGACTGAGG GTTCGAGTTG TGGCTATCTG ACCGTGCCAG AAAAACATGC TCTATATGGT 
CAGACCGCTT CAGATAAAAA GATTGAAATA GCAGTACTCA AGCTAGCTTC TACTTCAACA 
AATAAACAAG CCGACCCTGT TGTTTATCTT CAAGGTGGCC CTGGAGGCAG TGCCAGTTCA 
AGTATTGCTC AAGTGATAAA GACAGCTACT TTTATCAATG ACAGAGACGT ATATTTAGTC 
GACCAACGCG GTACTGGTTA TTCAAAGCCC GCACTACTTT GCACTGAGTT TGATGAAGCA 
GGTACACCTG ACCAAGTACA GGCGTGTAAA GCAAGATTAG AAAATTCTGG AGTGGATTTA 
AATGCTTATC ATAGCGTACA TAATGCCATG GACATTATTC AGCTCAGAAC CGCATTAAAA 
ATATCACAAT GGAATTTGTA CGGTATTTCT TATGGCACAC GATTAGCCAC AACTATCATG 
CGAGAAAATA GCGAAGGCAT TCGCAGTGTC ATCTTAGATG GTATGTTTCC GATAGAAGTT 
AACGGTATCT CTGATACGCC ATGGGCGAAC TATGAATCAC TGAATCAAAT AATTAAAAAC 
TGTGAGAATA CCGACGATTG CCCTCCTGAA GAAGTAAAAG CGGTTATCGA AGATATTATT 
GCCCGTATGC ATAATGAAGG CATGGTAAAA GAGAGTCGAG AATTTATCCA AACCTTGCTT 
AACATGTCCT CTGAATCAGT TATCCTTGAC TACTTGTTAG CGGTTAATAA AGATATCAGT 
AAGTATGCAT CTGCCTTAGA TACAATCACT GAAGAGCAGA ATGAAGGTGA TGAACAAGGC 
GAGGAAGAGC TTTTTTATAA TGCGATGGGA TTATCTACTG TTTGTGCAGA AGAATATCCA 
TTTCTTAATA TAACCGCTTT AGTTGATGAT AATAGTCAAG GTTGGTCGGC AAGTACCCAA 
CTAGCGGTGA ATGGCATGTT TCATATGGGC TTTGATGCCG CATCTTGTAA AGCTTGGGAT 
GTAGCCTCAG CAAATGATAT TGAGACACAA GCCGTTACCA GTGATCTTCC TGTATTAATT 
CTCAATGGTC TGCAGGATCC GCAGACACCT GCTGCTTGGG GAACGTTAGT CGCGAAAAAC 
ATGCCTAATG CACAAAGTGT GACTAACCCA CAAGGCGGTC ATGGGCAATT GTTTTCAGGC 
TTAAGTTGTT TTGACACTAT GGCCGCTAAT TTTTTAGCTA ATCCAAATAA AACGCTTGAG 
ACTAGTTGTG TTTCAGATAT TGCGGAACTA AGTTACGAAG CCAGTGATCA AGAAGAATCT 
GCGAACTTTA CTTTTAAAGG TGATGATAGC AGTGCAGATA CCGTTTACAT GAATGGAGTT 
ATCGGCTCAG ACACCTTAAA AGTCATGCAA AAACTGTTTA GCGATTATCC TCAGGTCAAA 
ACTATTGTCA TGCAAAATGT ACCTGGTTCT ATGGATGATG AGATTAATTT GTTAGCATCA 
ACGGAACTAA GAAATCACGG TATTAACACA CATATTCCTG CTGACGGCAT GGTAGCCTCA 
GGCGGTACCG ATATGTTTTT AGCTGGTGTT AAACGTACCG TTGAAGCTGG AGCTAGATTA 
GGGGTTCATT CGTGGAGTGA CGGCAGTGGT ACGGCTGCTC TTGATTACCC AAGAGATCAT 
CAAGAGCATG TTAAATACCT AGATTATTAT AGAGTCATGG GAATTCCTGC TGACTTTTAT 
TGGTATACCC TTGAGGCTGC ATCTGCTGAA AATATACATT GGATGACAAC ACAAGAAATT 
ACTCAATACG GCATATTAGC AGAGTAA 

 

Protein sequence

MVPTNRTLIA SAIIATSLLA ACGDSSSKSN VTTDKAVTTP VNSFKTVACK SMLPSAKVAL 
LTEGSSCGYL TVPEKHALYG QTASDKKIEI AVLKLASTST NKQADPVVYL QGGPGGSASS 
SIAQVIKTAT FINDRDVYLV DQRGTGYSKP ALLCTEFDEA GTPDQVQACK ARLENSGVDL 
NAYHSVHNAM DIIQLRTALK ISQWNLYGIS YGTRLATTIM RENSEGIRSV ILDGMFPIEV 
NGISDTPWAN YESLNQIIKN CENTDDCPPE EVKAVIEDII ARMHNEGMVK ESREFIQTLL 
NMSSESVILD YLLAVNKDIS KYASALDTIT EEQNEGDEQG EEELFYNAMG LSTVCAEEYP 
FLNITALVDD NSQGWSASTQ LAVNGMFHMG FDAASCKAWD VASANDIETQ AVTSDLPVLI 
LNGLQDPQTP AAWGTLVAKN MPNAQSVTNP QGGHGQLFSG LSCFDTMAAN FLANPNKTLE 
TSCVSDIAEL SYEASDQEES ANFTFKGDDS SADTVYMNGV IGSDTLKVMQ KLFSDYPQVK 
TIVMQNVPGS MDDEINLLAS TELRNHGINT HIPADGMVAS GGTDMFLAGV KRTVEAGARL 
GVHSWSDGSG TAALDYPRDH QEHVKYLDYY RVMGIPADFY WYTLEAASAE NIHWMTTQEI 
TQYGILAE