13 homologs were found in PanDaTox collection
for query gene STER_1987 on replicon NC_008532
Organism: Streptococcus thermophilus LMD-9



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008532  STER_1987  XRE-family DNA-binding domain-containing protein  100 
 
 
285 aa  571  1.0000000000000001e-162  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2234  XRE-family DNA-binding domain-containing protein  26.87 
 
 
298 aa  85.5  0.000000000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.00374072  n/a   
 
 
-
 
NC_008531  LEUM_0582  Xre-like DNA-binding protein  28.57 
 
 
291 aa  60.5  0.00000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0704393  n/a   
 
 
-
 
NC_009524  PsycPRwf_1903  hypothetical protein  26.67 
 
 
281 aa  59.7  0.00000005  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0520  hypothetical protein  27.08 
 
 
345 aa  55.5  0.000001  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1340  Xre-like DNA-binding protein  34.41 
 
 
340 aa  53.5  0.000004  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000360775  normal 
 
 
-
 
NC_010320  Teth514_1186  hypothetical protein  25.44 
 
 
266 aa  47  0.0003  Thermoanaerobacter sp. X514  Bacteria  normal  0.613527  n/a   
 
 
-
 
NC_012793  GWCH70_1185  transcriptional regulator, XRE family  20.96 
 
 
296 aa  46.2  0.0005  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.0000101006  n/a   
 
 
-
 
NC_011899  Hore_08820  Helix-turn-helix  28.37 
 
 
258 aa  45.1  0.001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000147566  n/a   
 
 
-
 
NC_009767  Rcas_2286  response regulator receiver protein  35.59 
 
 
263 aa  43.5  0.004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.0000997036 
 
 
-
 
NC_013385  Adeg_1943  transcriptional regulator, putative  40.58 
 
 
246 aa  43.5  0.004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0651  hypothetical protein  23.08 
 
 
271 aa  43.1  0.005  Psychrobacter cryohalolentis K5  Bacteria  normal  0.294902  normal 
 
 
-
 
NC_013411  GYMC61_2078  transcriptional regulator, XRE family  30.56 
 
 
297 aa  42.7  0.006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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