55 homologs were found in PanDaTox collection
for query gene RoseRS_2673 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_2673  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 
127 aa  259  6.999999999999999e-69  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2741  pyridoxamine 5'-phosphate oxidase-related FMN-binding  85.71 
 
 
125 aa  214  2.9999999999999998e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2293  pyridoxamine 5'-phosphate oxidase-related FMN-binding  53.66 
 
 
130 aa  135  2e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.447801  normal  0.659789 
 
 
-
 
NC_013595  Sros_7681  hypothetical protein  50 
 
 
126 aa  102  1e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28180  Pyridoxamine 5'-phosphate oxidase  42.86 
 
 
133 aa  102  2e-21  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5710  hypothetical protein  49.06 
 
 
122 aa  100  7e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3423  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.41 
 
 
127 aa  95.5  2e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0560971  normal  0.446466 
 
 
-
 
NC_009565  TBFG_12097  hypothetical protein  44.14 
 
 
134 aa  95.1  3e-19  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000000214242  normal 
 
 
-
 
NC_008146  Mmcs_2497  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  44.44 
 
 
127 aa  94.4  5e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2534  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  44.44 
 
 
127 aa  94.4  5e-19  Mycobacterium sp. JLS  Bacteria  normal  0.44117  normal  0.584436 
 
 
-
 
NC_008705  Mkms_2542  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  44.44 
 
 
127 aa  94.4  5e-19  Mycobacterium sp. KMS  Bacteria  normal  0.273534  normal 
 
 
-
 
NC_013441  Gbro_4095  PPOX class putative F420-dependent enzyme  41.6 
 
 
139 aa  92  2e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2364  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  41.94 
 
 
131 aa  90.9  6e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.486717  n/a   
 
 
-
 
NC_009664  Krad_3081  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.71 
 
 
135 aa  89  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0505941 
 
 
-
 
NC_009338  Mflv_3113  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.16 
 
 
127 aa  86.7  1e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117914  normal 
 
 
-
 
NC_009953  Sare_0171  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 
126 aa  83.6  8e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00195417 
 
 
-
 
NC_009380  Strop_0162  hypothetical protein  40.57 
 
 
160 aa  81.6  0.000000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.042536  normal 
 
 
-
 
NC_008705  Mkms_2543  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.27 
 
 
128 aa  80.5  0.000000000000007  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2498  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  42.27 
 
 
128 aa  80.5  0.000000000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2535  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.27 
 
 
128 aa  80.5  0.000000000000007  Mycobacterium sp. JLS  Bacteria  normal  0.453741  normal  0.592409 
 
 
-
 
NC_009921  Franean1_1299  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.83 
 
 
135 aa  79  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.608546  normal 
 
 
-
 
NC_013235  Namu_2099  hypothetical protein  42.11 
 
 
142 aa  77.8  0.00000000000005  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00417962  normal  0.0578281 
 
 
-
 
NC_010085  Nmar_1094  pyridoxamine 5'-phosphate oxidase family protein  36 
 
 
130 aa  77.4  0.00000000000007  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008726  Mvan_0274  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.25 
 
 
141 aa  76.6  0.0000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.785048  normal 
 
 
-
 
NC_014158  Tpau_3872  hypothetical protein  44.09 
 
 
131 aa  75.1  0.0000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3422  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.39 
 
 
130 aa  73.2  0.000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0855495  normal  0.476438 
 
 
-
 
NC_009338  Mflv_3114  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.43 
 
 
140 aa  72  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0449856  normal 
 
 
-
 
NC_014158  Tpau_0496  PPOX class putative F420-dependent enzyme  36.52 
 
 
126 aa  71.2  0.000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0093  hypothetical protein  33.06 
 
 
142 aa  60.8  0.000000007  Thermobifida fusca YX  Bacteria  hitchhiker  0.0000689515  n/a   
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  35.14 
 
 
141 aa  50.4  0.000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_013526  Tter_1971  hypothetical protein  34.17 
 
 
127 aa  48.1  0.00004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.33 
 
 
141 aa  47.8  0.00005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  45.65 
 
 
143 aa  47.4  0.00007  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_008148  Rxyl_0524  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  35.62 
 
 
134 aa  47  0.0001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.207279  n/a   
 
 
-
 
NC_009565  TBFG_13405  hypothetical protein  29.77 
 
 
144 aa  45.8  0.0002  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  1.48277e-23  normal  0.570254 
 
 
-
 
NC_013131  Caci_5545  pyridoxamine 5'-phosphate oxidase-related FMN- binding  46.81 
 
 
142 aa  45.1  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2456  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.73 
 
 
171 aa  44.7  0.0005  Caulobacter sp. K31  Bacteria  normal  0.502325  normal  0.600278 
 
 
-
 
NC_013521  Sked_11700  Pyridoxamine 5'-phosphate oxidase  29.89 
 
 
125 aa  43.9  0.0007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0372391  normal  0.434498 
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.36 
 
 
129 aa  43.5  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.116644 
 
 
-
 
NC_007802  Jann_0506  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40 
 
 
158 aa  43.1  0.001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.3 
 
 
150 aa  42.4  0.002  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.000271809  n/a   
 
 
-
 
NC_013595  Sros_7841  hypothetical protein  38.3 
 
 
139 aa  42.7  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.145006  normal 
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  32.2 
 
 
146 aa  41.6  0.004  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_007777  Francci3_2112  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25 
 
 
129 aa  41.6  0.004  Frankia sp. CcI3  Bacteria  hitchhiker  0.00365817  normal  0.44749 
 
 
-
 
NC_009523  RoseRS_0526  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.52 
 
 
122 aa  41.6  0.004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0712178 
 
 
-
 
NC_013595  Sros_2725  hypothetical protein  27.37 
 
 
172 aa  41.2  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.381654  normal 
 
 
-
 
NC_014151  Cfla_2114  putative F420-dependent enzyme  32.14 
 
 
133 aa  41.2  0.005  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1040  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  26.37 
 
 
139 aa  41.2  0.005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.239296 
 
 
-
 
NC_008781  Pnap_4000  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.29 
 
 
150 aa  40.8  0.006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.166717  normal 
 
 
-
 
NC_008705  Mkms_1779  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.57 
 
 
143 aa  40.8  0.006  Mycobacterium sp. KMS  Bacteria  normal  0.0691988  normal 
 
 
-
 
NC_008146  Mmcs_1732  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  28.57 
 
 
143 aa  40.8  0.006  Mycobacterium sp. MCS  Bacteria  normal  0.455039  n/a   
 
 
-
 
NC_009077  Mjls_1711  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.57 
 
 
143 aa  40.8  0.006  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1279  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.52 
 
 
127 aa  40.8  0.006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.381542 
 
 
-
 
NC_013441  Gbro_3771  PPOX class putative F420-dependent enzyme  33.96 
 
 
143 aa  40.8  0.007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6470  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.26 
 
 
128 aa  40  0.01  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.941513  normal 
 
 
-
 
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