| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11700 |
|---|
| Symbol | |
|---|
| ID | 8632806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1354876 |
|---|
| End bp | 1355253 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_003313947 |
|---|
| Protein GI | 269794492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0372391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.434498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCACT CAGCCCTCCT CGACGCCTCG CTGCACCTGT GGCTCACGGC GAACCGGCCC
GACGGACCTC CGCACACCAC CCCGCTGTGG TTCGTGCACG ACGACGACGC CCTGTGGGTG
TCGGTCCGGC AGACGTCGTG GAAGGCCCGG CTGCTGCGGC TCGACCCGCG GGTCAGCCTC
GCGGTCGAGG GCACGGCACC GGCGGGCGGA CTCGTCGGGG AGGGCACGGC CGAGCTCGTC
GAGGTCGGCT CGCGTCCCGA CGTCGCTCGG GCGTTCGCCG CGCGCTACGA CGGGTGGGAC
GGGGCGGACC CCGCGACCGA CGGACCGCGT GTGCTCGCGA AGATCACCCT CAGCCGGTGG
TTCCAAGAGC CCCTCTGA
|
|---|
| Protein sequence | MRHSALLDAS LHLWLTANRP DGPPHTTPLW FVHDDDALWV SVRQTSWKAR LLRLDPRVSL
AVEGTAPAGG LVGEGTAELV EVGSRPDVAR AFAARYDGWD GADPATDGPR VLAKITLSRW
FQEPL
|
|---|
| |