42 homologs were found in PanDaTox collection
for query gene Rfer_2436 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_2436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 150 aa  308  2e-83  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.000271809  n/a   
 
 
-
 
NC_008781  Pnap_4000  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  92 
 
 		 150 aa  284  2.9999999999999996e-76  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.166717  normal  1 
 
 
-
 
NC_010622  Bphy_2360  pyridoxamine 5'-phosphate oxidase-related FMN-binding  78 
 
 		 150 aa  253  5e-67  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.233006 
 
 
-
 
NC_007348  Reut_B5702  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  74 
 
 		 150 aa  241  1.9999999999999999e-63  Ralstonia eutropha JMP134  Bacteria  normal  0.884169  n/a   
 
 
-
 
NC_007404  Tbd_0006  hypothetical protein  72.19 
 
 		 151 aa  225  1e-58  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_1947  pyridoxamine 5'-phosphate oxidase-related FMN-binding  71.33 
 
 		 155 aa  225  2e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.000031905  n/a   
 
 
-
 
NC_013889  TK90_2082  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  70 
 
 		 155 aa  222  2e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.510158  normal  1 
 
 
-
 
NC_007964  Nham_1962  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  75.79 
 
 		 158 aa  152  1e-36  Nitrobacter hamburgensis X14  Bacteria  normal  0.181208  n/a   
 
 
-
 
NC_010338  Caul_0850  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.06 
 
 		 155 aa  117  6e-26  Caulobacter sp. K31  Bacteria  normal  0.119424  normal  0.155123 
 
 
-
 
NC_007955  Mbur_1693  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.51 
 
 		 148 aa  100  8e-21  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00000026689  n/a   
 
 
-
 
NC_010338  Caul_3763  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.55 
 
 		 166 aa  100  9e-21  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2456  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.29 
 
 		 171 aa  98.6  3e-20  Caulobacter sp. K31  Bacteria  normal  0.502325  normal  0.600278 
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  29.05 
 
 		 146 aa  87.4  7e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_007517  Gmet_2113  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  31.58 
 
 		 158 aa  69.3  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.64 
 
 		 155 aa  54.7  0.0000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.313411 
 
 
-
 
NC_013131  Caci_7774  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.5 
 
 		 129 aa  51.2  0.000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_4137  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  37.88 
 
 		 172 aa  50.8  0.000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.428154  normal  1 
 
 
-
 
NC_013595  Sros_2725  hypothetical protein  32.65 
 
 		 172 aa  48.9  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.381654  normal  1 
 
 
-
 
NC_012669  Bcav_1040  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  30.43 
 
 		 139 aa  48.5  0.00003  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.239296 
 
 
-
 
NC_008609  Ppro_0574  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  22.76 
 
 		 158 aa  48.1  0.00004  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  29.91 
 
 		 129 aa  46.6  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.116644 
 
 
-
 
NC_013131  Caci_6484  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.33 
 
 		 122 aa  46.2  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  36.67 
 
 		 163 aa  45.1  0.0003  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal  1 
 
 
-
 
NC_009921  Franean1_0365  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.41 
 
 		 130 aa  44.3  0.0006  Frankia sp. EAN1pec  Bacteria  normal  0.0234579  hitchhiker  0.00208222 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.94 
 
 		 169 aa  44.3  0.0006  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.94 
 
 		 169 aa  44.3  0.0006  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.0501649 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.94 
 
 		 169 aa  44.3  0.0006  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_009921  Franean1_0582  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.87 
 
 		 150 aa  43.1  0.001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2998  nitroimidazole resistance protein, putative  30.56 
 
 		 180 aa  42.7  0.002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2673  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.3 
 
 		 127 aa  42.4  0.002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8501  hypothetical protein  25.93 
 
 		 137 aa  42  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5116  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.1 
 
 		 170 aa  41.6  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.00582982  normal  0.597944 
 
 
-
 
NC_014210  Ndas_4464  putative F420-dependent enzyme  30.51 
 
 		 128 aa  41.6  0.004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0827  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.92 
 
 		 163 aa  41.2  0.004  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2318  hypothetical protein  35 
 
 		 133 aa  41.2  0.005  Thermobifida fusca YX  Bacteria  normal  0.238988  n/a   
 
 
-
 
NC_013132  Cpin_0886  pyridoxamine 5'-phosphate oxidase  30.77 
 
 		 214 aa  40.8  0.006  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  33.8 
 
 		 141 aa  40.8  0.006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_013595  Sros_3594  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.1 
 
 		 132 aa  40.8  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0641507  normal  1 
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  32.43 
 
 		 143 aa  40.8  0.007  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_008726  Mvan_0059  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.39 
 
 		 165 aa  40.4  0.007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.291977 
 
 
-
 
NC_009921  Franean1_3648  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.93 
 
 		 176 aa  40.4  0.008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0832  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  41.27 
 
 		 144 aa  40  0.01  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.748606  normal  0.753122 
 
 
-
 
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