| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2741 |
|---|
| Symbol | |
|---|
| ID | 5540227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3544478 |
|---|
| End bp | 3544855 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640894867 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001432830 |
|---|
| Protein GI | 156742701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR03666] PPOX class probable F420-dependent enzyme, Rv2061 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCC CGTTCGCCCC GCTTGCCGGT CATCAGTATA TGAACCTGAC GACCTTCCGT
AAAAATGGAC AACCGGTGCC GACGCCGGTC TGGTTCGCGC AGGAAGGGGA TCGCATCTAT
GTGGTAACGC TTGCCACATC AGGGAAAGCA AAGCGCATTC GTGCCAATCC GCGCGTGCAA
TTGACGCCGA GTGATGCTCG TGGGAAACCG CTTGGCGAGA CTATCGAAGG GCACGCGCGC
ATCCTCGATC CTTCCGAGCA GGAAATCGGG CATCGTGCGC TGGCGAAGAA GTATGGCGTG
ATGTACTGGA TGTTTGCAAC GCTCTGGAAA CTCCGGCGCC TGACGCCGGT CTTTCTCGCA
ATAACGCCGG AAGCGTAA
|
|---|
| Protein sequence | MITPFAPLAG HQYMNLTTFR KNGQPVPTPV WFAQEGDRIY VVTLATSGKA KRIRANPRVQ
LTPSDARGKP LGETIEGHAR ILDPSEQEIG HRALAKKYGV MYWMFATLWK LRRLTPVFLA
ITPEA
|
|---|
| |