Gene Caci_5545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5545 
Symbol 
ID8336905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6395206 
End bp6395634 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content68% 
IMG OID644958649 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003116245 
Protein GI256394681 
COG category 
COG ID 
TIGRFAM ID[TIGR03667] PPOX class probable F420-dependent enzyme, Rv3369 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC TGGATCACCT CTCCGACGCC GACCGGCAGC GCGTCCTGGG CCGTCTGAAC 
AGCAACCTCA TGGTCTGGCT GACCACCGTG CGCCCGGACG GCCAGCCGGT CAGCGTCCCG
GTCTGGTTCC TGGCGCGCGA GGACGGGACC CTGCTCATCT ACAGCCGCGC GAACAAGGCG
AAGCTGGCCA ACATCGCGGC GAACCCGAAG GTGAGCCTCG GCCTGGACGT CACCGACATC
GGGCGCAACA TCGTGCGGCT GGAGGGCGTG GCGCACCACG ACCCCAGCCT GCCGCGCGCC
CACGAGCACC CGGCGTTCCT CGCCAAGTAC ATCGAGCGCA TGGGCGCCAT GTTCGACACG
CCCGAGAACT TCGGCGACCA GTTCACCGCC GGTCTGGTGA TCCAGCTGAC GAAGGTCTAC
GTCGGCTAG
 
Protein sequence
MELLDHLSDA DRQRVLGRLN SNLMVWLTTV RPDGQPVSVP VWFLAREDGT LLIYSRANKA 
KLANIAANPK VSLGLDVTDI GRNIVRLEGV AHHDPSLPRA HEHPAFLAKY IERMGAMFDT
PENFGDQFTA GLVIQLTKVY VG