| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1040 |
|---|
| Symbol | |
|---|
| ID | 7859814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1180549 |
|---|
| End bp | 1180968 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643865125 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related protein FMN-binding |
|---|
| Protein accession | YP_002881063 |
|---|
| Protein GI | 229819537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03618] PPOX class probable F420-dependent enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.239296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCA CCATCCCGGC CGGCTTCGCC GACCTGCTCG AGCGTCCCCT GTTCGCCCAC
CTCGCGACCG TCCACCCGGA CGGGTCGCCG CAGAGCAGCG TCATGTGGTT CGTCTGGGAG
GGCGACGTCA TCCGCTTCAC GCACACGTCC CGGCGGCAGA AGTACCGGAA CGTCGCGCAC
GAGCCGCGCG TCGCGCTCTC GATCGTCGAC CCGGACGACA CCGGCCGCTA CCTGGAGATC
CGCGGTCAGG TGATCTCCGT GGAGCCCGAC GACGCGGAGG CGTCCTTCTA CCGTTCCCTC
CAGGAGCGCT ACGGCGACGT CTACCCGATC ACCGACGCCG ACGTCCGCGT GGTGATCACC
GTGCTGCCCG AGTACGCCCG CGGACGCGGC GAGGGCGACA CCTCCTCCGT CGTGTCCTGA
|
|---|
| Protein sequence | MASTIPAGFA DLLERPLFAH LATVHPDGSP QSSVMWFVWE GDVIRFTHTS RRQKYRNVAH
EPRVALSIVD PDDTGRYLEI RGQVISVEPD DAEASFYRSL QERYGDVYPI TDADVRVVIT
VLPEYARGRG EGDTSSVVS
|
|---|
| |