Gene Franean1_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1299 
Symbol 
ID5669712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1569255 
End bp1569662 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID641240231 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001505659 
Protein GI158313151 
COG category 
COG ID 
TIGRFAM ID[TIGR03666] PPOX class probable F420-dependent enzyme, Rv2061 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.608546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAG CCGTCACACT GCCTGCATGG ACCGAAACGT CGAAGTACCT GTCACTGACC 
ACCTTTCGCA GTGACGGGCG ATCCGTCTCG ACGCCGGTGT GGTTCGTGGT CAACGGCGCC
GAGCTGCTCG TTCTTACCGA CGAAAAAAGC GGAAAGGTGC GCCGTCTGCG TGACTCCCCG
CGGGCGACGG TCGCCCCGTG CGACGCCCGC GGAAAGGCGG CGGAGAGCCC GGTGGAGGTG
ATGGCAGAGG TCGTCCCGGA ACGTACCGGT GCCGCGCGGG CCATGGTGCG CCACCGTTAC
CGGGTCGCGG CGCCGCTGGT CTCGGCCATG TCGAAGGCGG CGCGCGCGGT GCGCCGGCGT
CCGCCGGAGA CCCAGACCGC CATCCGGATC ACCCTGCCCG GCTGGTAG
 
Protein sequence
MSSAVTLPAW TETSKYLSLT TFRSDGRSVS TPVWFVVNGA ELLVLTDEKS GKVRRLRDSP 
RATVAPCDAR GKAAESPVEV MAEVVPERTG AARAMVRHRY RVAAPLVSAM SKAARAVRRR
PPETQTAIRI TLPGW