Gene Svir_28180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28180 
Symbol 
ID8388142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3057230 
End bp3057631 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID644976849 
ProductPyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003134626 
Protein GI257056794 
COG category 
COG ID 
TIGRFAM ID[TIGR03666] PPOX class probable F420-dependent enzyme, Rv2061 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG TGGACGAAGA AGCCGAATTG GCACGACTCG ACGCCGAGAA GTACGTCTCG 
CTGGTGACTT TCCGTAAGAA CGGGACCGGG GTGGCCACCC CGGTCTGGAT CGCGCGCGAC
GGCACCGAAC TACTGGTGTT CAGTGAGCGC AACGCGGGGA AGGTGAAGCG CATCCGACAC
ACTCCCCGGG TCGAGCTCAC GGCGTGCGAC ATGCTCGGCA AGAAAACCCA CGGAGCGACC
GTCACCGGCA AGGCACGGAT CCTCGATGAC GCGGGCAGCG AACACGCCAG GAAGGTGATC
GCGCGACGTT ACGGACTGCT GGGCAGGGTG ACGATGCTGC TCAGCCGGCT CCGGGGAGGC
CCGCAGCGCA CCGTGGGGAT CGCCATCACG CTGTCCGACT GA
 
Protein sequence
MTVVDEEAEL ARLDAEKYVS LVTFRKNGTG VATPVWIARD GTELLVFSER NAGKVKRIRH 
TPRVELTACD MLGKKTHGAT VTGKARILDD AGSEHARKVI ARRYGLLGRV TMLLSRLRGG
PQRTVGIAIT LSD