36 homologs were found in PanDaTox collection
for query gene Pnap_4000 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008781  Pnap_4000  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 150 aa  306  5e-83  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.166717  normal  1 
 
 
-
 
NC_007908  Rfer_2436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  92 
 
 		 150 aa  284  2.9999999999999996e-76  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.000271809  n/a   
 
 
-
 
NC_010622  Bphy_2360  pyridoxamine 5'-phosphate oxidase-related FMN-binding  82 
 
 		 150 aa  261  3e-69  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.233006 
 
 
-
 
NC_007348  Reut_B5702  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  77.33 
 
 		 150 aa  243  6e-64  Ralstonia eutropha JMP134  Bacteria  normal  0.884169  n/a   
 
 
-
 
NC_011901  Tgr7_1947  pyridoxamine 5'-phosphate oxidase-related FMN-binding  75.33 
 
 		 155 aa  231  3e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.000031905  n/a   
 
 
-
 
NC_007404  Tbd_0006  hypothetical protein  74.17 
 
 		 151 aa  230  5e-60  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_2082  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  73.33 
 
 		 155 aa  228  3e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.510158  normal  1 
 
 
-
 
NC_007964  Nham_1962  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.7 
 
 		 158 aa  155  2e-37  Nitrobacter hamburgensis X14  Bacteria  normal  0.181208  n/a   
 
 
-
 
NC_010338  Caul_0850  pyridoxamine 5'-phosphate oxidase-related FMN-binding  41.26 
 
 		 155 aa  109  1.0000000000000001e-23  Caulobacter sp. K31  Bacteria  normal  0.119424  normal  0.155123 
 
 
-
 
NC_010338  Caul_2456  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.57 
 
 		 171 aa  102  2e-21  Caulobacter sp. K31  Bacteria  normal  0.502325  normal  0.600278 
 
 
-
 
NC_010338  Caul_3763  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.81 
 
 		 166 aa  97.8  4e-20  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_1693  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.8 
 
 		 148 aa  93.2  1e-18  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00000026689  n/a   
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  31.76 
 
 		 146 aa  89.7  1e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_007517  Gmet_2113  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  31.17 
 
 		 158 aa  67  0.00000000008  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6484  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.5 
 
 		 122 aa  53.1  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.82 
 
 		 155 aa  51.2  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.313411 
 
 
-
 
NC_013595  Sros_2725  hypothetical protein  34.74 
 
 		 172 aa  50.8  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.381654  normal  1 
 
 
-
 
NC_012669  Bcav_4137  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  29.46 
 
 		 172 aa  49.3  0.00002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.428154  normal  1 
 
 
-
 
NC_013131  Caci_7774  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.5 
 
 		 129 aa  48.1  0.00004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_1040  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  31.43 
 
 		 139 aa  44.7  0.0004  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.239296 
 
 
-
 
NC_002939  GSU2998  nitroimidazole resistance protein, putative  27.59 
 
 		 180 aa  43.9  0.0007  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6470  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.78 
 
 		 128 aa  43.1  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.941513  normal  1 
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  33.78 
 
 		 143 aa  43.5  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.37 
 
 		 129 aa  42.4  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.116644 
 
 
-
 
NC_008726  Mvan_5116  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.1 
 
 		 170 aa  42.4  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.00582982  normal  0.597944 
 
 
-
 
NC_009921  Franean1_3648  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.67 
 
 		 176 aa  42  0.003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.14 
 
 		 169 aa  42  0.003  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.14 
 
 		 169 aa  42  0.003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.0501649 
 
 
-
 
NC_008609  Ppro_0574  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.49 
 
 		 158 aa  41.6  0.003  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32.14 
 
 		 169 aa  42  0.003  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_013165  Shel_20760  predicted flavin-nucleotide-binding protein  27.34 
 
 		 167 aa  41.2  0.005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2673  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.29 
 
 		 127 aa  40.8  0.006  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3832  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  35.71 
 
 		 174 aa  40.8  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.954324  normal  1 
 
 
-
 
NC_013595  Sros_8501  hypothetical protein  25.93 
 
 		 137 aa  40.8  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  32.56 
 
 		 163 aa  40.4  0.009  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal  1 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32.39 
 
 		 141 aa  40  0.01  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
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