Gene Rxyl_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0524 
Symbol 
ID4116296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp554886 
End bp555290 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID638035312 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding protein 
Protein accessionYP_643310 
Protein GI108803373 
COG category[R] General function prediction only 
COG ID[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme
[TIGR03667] PPOX class probable F420-dependent enzyme, Rv3369 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTGG TGGAGCCCTG GGTCGAGCGG CGGCTGAGGG AGGAGAAGAT CCTCTGGCTC 
ACCACGGTGC GGGCGGACGG CCAGCCGCAG CCGGTGCCGG TGTGGTTTTT GTGGGGGACG 
GAGGGTTTTT TGATCTACTC CAGGCCCAAC GCCCAGAAGC TGCGCAACAT CCGCTCGAAC 
CCGCGGGTGG GGCTGAACCT GAACTGCGAC GAGCGGGGAG GGAGCGTGGT GCGGGCGGAG 
GGGACGGCGG AGATCGTGGA GGACGCCGCC CCGGCCTCGG AGATCCCGGA GTACGTGCAG 
AAGTACCGGG AGGACATGCG CCGGCTGGGC TACGAGCCGG CGGGCTTCGC GCTGGACTAC 
GCGGTCGCCG TCCGGGTGAC CCCGCGCCGC TGGCAGAGCT GGTAG
 
Protein sequence
MAVVEPWVER RLREEKILWL TTVRADGQPQ PVPVWFLWGT EGFLIYSRPN AQKLRNIRSN 
PRVGLNLNCD ERGGSVVRAE GTAEIVEDAA PASEIPEYVQ KYREDMRRLG YEPAGFALDY 
AVAVRVTPRR WQSW