22 homologs were found in PanDaTox collection
for query gene Rleg_6409 on replicon NC_012854
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012854  Rleg_6409  putative sugar ABC transporter, substrate-binding protein  100 
 
 		 365 aa  734    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000000237151  normal  0.403501 
 
 
-
 
NC_011368  Rleg2_4516  putative sugar ABC transporter, substrate-binding protein  98.08 
 
 		 365 aa  719    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.112183  normal  1 
 
 
-
 
NC_011988  Avi_5039  ABC-type sugar transport system, periplasmic component  77.26 
 
 		 364 aa  572  1.0000000000000001e-162  Agrobacterium vitis S4  Bacteria  normal  0.797463  n/a   
 
 
-
 
NC_012791  Vapar_3345  putative sugar ABC transporter, substrate-binding protein  62.28 
 
 		 373 aa  436  1e-121  Variovorax paradoxus S110  Bacteria  normal  0.643163  n/a   
 
 
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NC_008786  Veis_2711  putative sugar ABC transporter, substrate-binding protein  58.06 
 
 		 369 aa  436  1e-121  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.210601 
 
 
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NC_012917  PC1_3690  hypothetical protein  50 
 
 		 366 aa  360  2e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_008309  HS_0765  ABC-type sugar-binding periplasmic protein  48.91 
 
 		 369 aa  358  9.999999999999999e-98  Haemophilus somnus 129PT  Bacteria  normal  0.234513  n/a   
 
 
-
 
NC_013421  Pecwa_3887  hypothetical protein  50 
 
 		 366 aa  357  9.999999999999999e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3931  hypothetical protein  50 
 
 		 366 aa  350  2e-95  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_1595  ABC-type sugar transport system periplasmic component-like protein  45.63 
 
 		 368 aa  318  1e-85  Acidiphilium cryptum JF-5  Bacteria  normal  0.32236  n/a   
 
 
-
 
NC_003296  RS02363  signal peptide protein  45.79 
 
 		 366 aa  308  1.0000000000000001e-82  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0272231 
 
 
-
 
NC_010623  Bphy_5185  putative signal peptide protein  45.67 
 
 		 377 aa  299  6e-80  Burkholderia phymatum STM815  Bacteria  normal  0.296404  normal  0.0737238 
 
 
-
 
NC_008709  Ping_1312  ABC transporter substrate-binding protein or LacI-type transcriptional regulator  45.48 
 
 		 357 aa  288  8e-77  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_3830  hypothetical protein  39.45 
 
 		 344 aa  206  6e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.985949  normal  1 
 
 
-
 
NC_008699  Noca_0806  ABC-type sugar transport system periplasmic component-like  25.08 
 
 		 398 aa  68.9  0.0000000001  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0679  ABC-type sugar transport system periplasmic component-like  28.1 
 
 		 387 aa  67.8  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_1810  ABC-type sugar transport system periplasmic component-like protein  24.61 
 
 		 388 aa  57.4  0.0000004  Arthrobacter sp. FB24  Bacteria  normal  0.0233725  n/a   
 
 
-
 
NC_008699  Noca_0604  ABC-type sugar transport system periplasmic component-like  24.03 
 
 		 391 aa  55.8  0.000001  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2342  ABC-type sugar transport system periplasmic component-like protein  21.5 
 
 		 378 aa  49.7  0.00008  Conexibacter woesei DSM 14684  Bacteria  normal  0.759463  normal  0.08592 
 
 
-
 
NC_011988  Avi_5305  ABC transporter, binding protein  27.59 
 
 		 346 aa  48.5  0.0002  Agrobacterium vitis S4  Bacteria  normal  0.325241  n/a   
 
 
-
 
NC_008699  Noca_0588  ABC-type sugar transport system periplasmic component-like  20.98 
 
 		 390 aa  48.1  0.0002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_3042  ABC-type sugar transport system periplasmic component-like protein  27.59 
 
 		 315 aa  44.7  0.003  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
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