Gene PC1_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3690 
Symbol 
ID8134670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4165283 
End bp4166383 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID644866990 
Producthypothetical protein 
Protein accessionYP_003019241 
Protein GI253690051 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT TTTTGCTGTT ATCAGGACTG ACCACCGTGT TATTAAGCAG CCAGCCAACA 
TGGGCTGACA GCTATCTCGA TCAGGCAACG GCAGCCGTTG CAAAAGCGAC CGCCAGCAGC 
ACGCAGTGGG ACGGCCCGAC TCAGGGGCCA CAGTTACAGC CGAATAAGAA GATTATTTTT 
ATTGCCTCCG ATATGAAAAA TGGCGGCGTT CAAGGCGTAC AGCAAGGGCT GAGCGAAGCA 
GCCAAAGCCG CAGGCTGGAA GCTGGAAACG TTGGACGGTG GCGGCTCGGT CAAAGATCAG 
TTGGCCTCAC TCAATCAGGC GATCGCTCAG AAGCCAGATG GCATTGTTAT TGGCGGTTGG 
AACCCGAATG TCGCCAAAAT CCCGCTGAAG AAAGCCATTC AACAAGGCAT TATTCTGACT 
GCATGGCATG CCGTACCTGA GCCGGGTCCC CTGCCTAAAT ACGATATTTT CTACAACGTG 
ACATCCGATT CGAATGACGT CGCCCGCATC GCCGCGCAAT ACGCCGTCGT AAAATCAGGT 
GGAAAAGCCA ATGTCTTAAT CTTTACCGAC TCCCTTTATC AAATCGCGCT TGATAAAGCC 
AATGTCATGA AAGACGAAAT CGGTAAATGC AGTGGTTGCA AGGTAGTGGA ATTCATCGAC 
ACACCGCTCG CCGATACAGC AAACCGTATG CCTGCCATGA CGTTTAGTCT GTTGCAGAAA 
TATGGCGACA GCTTCCAGTA TTCGCTGGCC ATTAACGACC TGTATTTTGA TTTCATGGCG 
CCGTCGTTAA AAACGGCTGG GAAAGGCGGT AAAAATGCAC CGTACAACAT TTCGGCTGGC 
GATGGTTCCA TCTCTGCCTA TCAACGTATT CGCTCCGGTG ATAGCCAATC CGCCACCGTT 
CCCGAGCCTC TGAAGCTGCA CGGCTGGCAG TTGCTAGATG AGTTTAACCG CGCCTTTGCC 
AAACAACCGC CTTCTGGCTA TGTCACCCCG GCACATTTGG TGACAGCCGA AAACATCGCG 
AACGATGGCG GTAATAACAA CCTGTATGAC CCGCAAAATG ATTATCAAGG CCATTACCGG 
GCAATCTGGG GTGTGAAATA A
 
Protein sequence
MKRFLLLSGL TTVLLSSQPT WADSYLDQAT AAVAKATASS TQWDGPTQGP QLQPNKKIIF 
IASDMKNGGV QGVQQGLSEA AKAAGWKLET LDGGGSVKDQ LASLNQAIAQ KPDGIVIGGW 
NPNVAKIPLK KAIQQGIILT AWHAVPEPGP LPKYDIFYNV TSDSNDVARI AAQYAVVKSG 
GKANVLIFTD SLYQIALDKA NVMKDEIGKC SGCKVVEFID TPLADTANRM PAMTFSLLQK 
YGDSFQYSLA INDLYFDFMA PSLKTAGKGG KNAPYNISAG DGSISAYQRI RSGDSQSATV 
PEPLKLHGWQ LLDEFNRAFA KQPPSGYVTP AHLVTAENIA NDGGNNNLYD PQNDYQGHYR 
AIWGVK